Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1002 ATGACCGGAAAAGCGAAACCAAAGAAGCACACGGCGAAGGAGATCGCCGCTAAGGTCGACGCCGCCACCACCAACCGTGGCGGAGGCAAGGCCGGCCAAGCAGACCGCTCCGGCCTCGACAAGGGCGGCCACGCTAAGCTCGAGTGCCCTCTCTGCAAAATCACCGCTCCCGACCTCAAATCGATGCAAATCCACCACGAAGCTCGCCATCCTAAGGTCCCTTTCGACGAGGCCAAGCTCTCCAATCTCCATGCCAGCTCCGTCCCCGAATCGTCTAAGCCTCGCCCTGGGGTTCGTGGCAGCTTCAAGAACACAGATACACTGCTGGGAGCCAGCCTATATAGCCTTTGA 351 0.5983 MTGKAKPKKHTAKEIAAKVDAATTNRGGGKAGQADRSGLDKGGHAKLECPLCKITAPDLKSMQIHHEARHPKVPFDEAKLSNLHASSVPESSKPRPGVRGSFKNTDTLLGASLYSL* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1002 116 SUPERFAMILY Expressed protein At2g23090/F21P24.15 29 77 - -
Vvi4g1002 116 PANTHER GEO09665P1-RELATED 1 83 IPR045230 -
Vvi4g1002 116 MobiDBLite consensus disorder prediction 63 77 - -
Vvi4g1002 116 MobiDBLite consensus disorder prediction 1 43 - -
Vvi4g1002 116 MobiDBLite consensus disorder prediction 63 104 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g1002 1 103 C2H2 Transcription Factor Family AT3G02790 72.115 6.48e-51 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1002 - - vri:117912867 215.698