Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0970 ATGCCCCCCATCAACCCATGGGCCATGGCTTTGGCGTTGCCGAAAGGACCACCTAAAACGACGCCGTGGTGGGAGAAGCAATCTTGTTGTGAATCTCATAGTGCCACCCATCAAAGATTCCATCACGAAACCCCTTGGTGTTTTCCTTGCTCATGTGGCGTTATCACCAACCCTCCTCCCTCTCCTTCATCTTTCATCTTCGTACTTTCCAGTTGCAGTGCATTGGATATGGCTGTCAATGCCGGCTTTTCTCTGCCCGCCATCTGTTCGCTATATTCATCATCAAAGCTCTCCACAATCCGACAGAGGCAGAATGGGAATCTGGTAATTGTCTGTGGATCTTCAAATGGGGGAGGGCTGGAGCTCAAATCCGCAGCTTCACGGAGGCAGAAGGGGAAGTTGGTAATTGTTTGTGCATCTTCTAATGGGCGAGGGCCGGAGTCCCTGGAGGATGGTGTCAAGAAGGTTGAGCGCATTCTTGAGGAGAAGCGCCGCGCTGAGTTATCAGCTCGGATTGCTTCTGGGGAGTTCACGGTGGCGAAACCTGGCTCTCCAGCTTTGTTGAAAAATAGTTTAGCAAAAGTGGGAATCCCTAGTGAGATTTTGGACTTTTTGTTTAAATGGATGGAAGTATCTGAAGATTATCCAAAGGTTCCTGAGGCAAAAGGGTCAATTAGAGCTGTTCGGAGTGAGGCTTTTTTCATCCCCTTATATGAGCTATACCTAACTTATGGTGGAATTTTCAGATTGACATTTGGTCCAAAGTCCTTTCTGATCGTTTCCGATCCTTCTATTGCTAAACATGTATTGAGGGACAACTCCAAGGCCTATTCAAAAGGTATCTTGGCCGAGATCCTAGAATTTGTAATGGGTAAGGGCCTTATCCCTGCTGATGGAGAGCTATGGCGTGTTAGACGACGTGCCATAGTCCCAGCATTGCATCAGAAGTATGTAGCAGCTATGATTAGCTTGTTTGGACAAGCTACAGATAGGCTCTGTAAGAAGTTAGATGCTGCTGCATCTGATGGGGAGGATGTAGAGATGGAATCACTTTTCTCTCATTTGACATTGGATATCATCGGCAAAGCAGTATTTAATTATGATTTTGATTCTTTGACAAATGATACTGGGATAGTTGAGGCTGTTTACGCTGTCTTGCGAGAAGCAGAAGATCGAAGTGTTGCACCAATTCCATTCTGGGAAATTCCAATTTGGAAAGACATTTCACCACGGCAGAGAAAGGTTAATGAAGCACTCAAGTTGATAAACAGTACACTCGATGATCTGATTGCAATATGCAAGAGGATGGTAGAAGAGGAAGAACTACAGTTTCATGAGGAATATATGAATGAAAAGGATCCTAGTATTCTTCACTTTCTTTTGGCATCAGGAGATGATGTTTCTAGCAAGCAACTTCGTGATGACTTGATGACATTGCTCATAGCTGGGCATGAAACATCTGCTGCAGTGTTAACATGGGCCTTTTATCTTCTCTCCAAGGAACCTAGTGTCATGTCTAAGCTCCAAAACGAGGTGGACTCTGTTTTAGGAGATCGGTTTCCAACTATTGAAGACATGAAGAAACTTAAGTACACAACTCGAGTGATCAATGAAGCATTGAGACTCTACCCACAACCACCTGTCTTGATCCGTCGTTCTCTTGAGAATGATGTGCTTGGAGGGTACCCAATAAAAAGGGGTGAAGATATCTTTATTTCTGTATGGAACCTACACCGGTGCCCAAAACATTGGGACGATGCAGATAAGTTTAATCCTGAAAGATGGCCTTTAGATGGACCAAATCCAAATGAGACAAATCAAAATTTCAGCTACCTGCCCTTTGGTGGAGGACCACGGAAATGTGTAGGCGATATGTTTGCTTCATTTGAGAATGTTGTAGCAGTTGCAATGCTTGTTCAACGGTTTAACTTTCAAATGGCAGTTGGAGCACCCCCAGTCAATATGACTACTGGTGCAACAATCCACACGACACAAGGGTTGAAGATGACGGTTACAAGAAGGACAAAACCTCCTATAGTACCCATATTAGAGACAACGATGCTGAAAGTGGATGAAACTGGTGGCGTTTCAAAAGAGAACCCAGTAATTAGTCAGAAAGGTGAAGTTTCTCCTGCTCCTTCATAG 2145 0.4443 MPPINPWAMALALPKGPPKTTPWWEKQSCCESHSATHQRFHHETPWCFPCSCGVITNPPPSPSSFIFVLSSCSALDMAVNAGFSLPAICSLYSSSKLSTIRQRQNGNLVIVCGSSNGGGLELKSAASRRQKGKLVIVCASSNGRGPESLEDGVKKVERILEEKRRAELSARIASGEFTVAKPGSPALLKNSLAKVGIPSEILDFLFKWMEVSEDYPKVPEAKGSIRAVRSEAFFIPLYELYLTYGGIFRLTFGPKSFLIVSDPSIAKHVLRDNSKAYSKGILAEILEFVMGKGLIPADGELWRVRRRAIVPALHQKYVAAMISLFGQATDRLCKKLDAAASDGEDVEMESLFSHLTLDIIGKAVFNYDFDSLTNDTGIVEAVYAVLREAEDRSVAPIPFWEIPIWKDISPRQRKVNEALKLINSTLDDLIAICKRMVEEEELQFHEEYMNEKDPSILHFLLASGDDVSSKQLRDDLMTLLIAGHETSAAVLTWAFYLLSKEPSVMSKLQNEVDSVLGDRFPTIEDMKKLKYTTRVINEALRLYPQPPVLIRRSLENDVLGGYPIKRGEDIFISVWNLHRCPKHWDDADKFNPERWPLDGPNPNETNQNFSYLPFGGGPRKCVGDMFASFENVVAVAMLVQRFNFQMAVGAPPVNMTTGATIHTTQGLKMTVTRRTKPPIVPILETTMLKVDETGGVSKENPVISQKGEVSPAPS* 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0970 714 Gene3D Cytochrome P450 216 683 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g0970 714 Pfam Cytochrome P450 238 657 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g0970 714 PANTHER CYTOCHROME P450 FAMILY 4 234 675 - -
Vvi4g0970 714 FunFam Carotene epsilon-monooxygenase, chloroplastic 219 676 - -
Vvi4g0970 714 SUPERFAMILY Cytochrome P450 229 674 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g0970 714 PRINTS E-class P450 group I signature 241 260 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g0970 714 PRINTS E-class P450 group I signature 491 517 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g0970 714 PRINTS E-class P450 group I signature 611 621 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g0970 714 PRINTS E-class P450 group I signature 621 644 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g0970 714 PRINTS E-class P450 group I signature 573 597 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g0970 714 PRINTS E-class P450 group I signature 471 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g0970 714 PRINTS E-class P450 group I signature 533 551 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g0970 714 MobiDBLite consensus disorder prediction 693 714 - -
Vvi4g0970 714 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 614 623 IPR017972 GO:0005506|GO:0016705
Vvi4g0970 714 PRINTS P450 superfamily signature 482 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g0970 714 PRINTS P450 superfamily signature 534 545 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g0970 714 PRINTS P450 superfamily signature 612 621 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g0970 714 PRINTS P450 superfamily signature 621 632 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g0970 714 CDD CYP97 235 668 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0970 Vvi-Chr4 15933842 15957007 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0970 143 683 Cytochrome P450 AT1G31800 82.998 0.0 934
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0970 K15747 - vvi:100240996 1313.13