Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi4g0924 | ATGGGATCAAGTAGTACCTATGCTGCACTTGTGTATTTTTCTGCTTACAATGCCAAGGAGTATGGAAAGACGGTCACGGTTAACCAATTTCAGGTTAAGGATGTTAGCTGGGATCCAGAGCTTGGTGGCCAAAATATGGAAATGCGTTTAGTGGAGTATTTTGCAGATGAGTTCAACCAACAAGTTGGAAATGGAGTTGATGTGAGGAAGTTCCCCAAGGCAATGGCTAAATTGAAGAAACAGGTTAAGCGGACAAAAGAAATTCTAAACTTCAGGAGTGCCATAACTTGTGAGAAGTTTGAGGAGCTCTGCGAAGATTTGTGGGAGAGATCTCTTATTCTTGTGAAGGAAGTGCTTAAGAATTCAGGTTTGAAGGTTGATGAGATATATGCAGTGGAGCTGATAGGAGGTGCCACTCGAGTGCCAAAGTTGCAGGCAAAGCTTCAGGAATTTCTTGGAAGGAAGGATCTGGACAGACATCTGGATGCTGATGAAGCTATAGTTCTTGGTGCTGCACTACATGCTGCAAATTTAAGTGATGGAATCAAATTGAATCGCAAGCTAGGAATGGTTGATGGTTCTTCATATGGACTCGTGGTTGAGTTAGATGGCCCTGGTCTTTTGAAAGATGAAAGCACTAGACAGTTAATTGTCCCAAGAATGAAAAAACTCCCCAGTAAGATGTTCAGATCCATTATCCATGACAAAGATTTTGATGTTTCACTTTCATATGAGGATGAAGATCTTCTACCGCCTGGTGTTTCCTCTCCTAGATTTGCTCAGTATGCCGTGTCTGGTTTGGCAGATGCTAGTGCAAAATACTCTTCTCGGAACCTGTCTTCTCCCATCAAGGCAAATCTGCATTTCTCTCTTAGTAGAAGTGGGATACTTTCTCTGGATCGAGCAGATGCTGTTACTGAAATAACAGAATGGATTGAAGTTCCCAAAGTGAATGTGACTCTGGAGAATTCATCTGCTGCATCCCCCAATATATCAGTTGAAACAAGTCCTCATAATGCTTCAGAAGACAGCAATGAAAACTTGCATACTGATGGCAGGATTGATAACACATCCAATGCCACTGAAAATCAAAGTGACAAGGATCTTGGCACAGAAAAAAAAACTGAAAAAGTAGTTGAGAAGACAGTGGCACCTGGAATGCCACTTTCAAAAGAATTAATTGCTGAAGCTAAACACAAGTTGGAAGCATTGGACAAAAAGGATGTAGAGCGGCGTAGATCTGCAGAGTTAAAAAATAATCTGGAAGGATACATCTATACTACTAAAGAAAAGCTTGAATCATCTGAGGAGTTAGAGAAGATATCAACCACTCAGGAACGCCAGTCCTTTATTGAAAAGCTTGATGAGGTGCAAGAATGGTTGTATACTGATGGTGAAGATGCTACAGCTGCTGAGTTTCAAGAACGTCTAGATTTGTTAAAATCTATTGGTGACCCAATATTTTTCAGATTGAATGAGCTTACTGCATGGCCAGCGGCAATGGAAGATGCTCGCAAATACCTTGGTCAGCTGAAACAGATTGTACAGGACTGGGAGACAAAGAAACCTTGGCTTCTGAAAGATAAAATAGATGAGGTCCTGAGTGATGGTGACAAGGTCAAAAATTGGTTGGAAGAGAAAGAGGCCGAGCAGAAAAAGACTTCTGGATTCAGCACTCCTGCATTTACCTCAGATGAGGTGTATGAGAAAATTTTCAAATTTCAAGAGAAGGTTGCCAGCATCAACCGAATTCCTAAGCCAAAGCCAAAAATTGAGAAGCCCACAAAGAATGAAACCACAAACAATGGGGCTAGCAGTGAGAGAAAGCAAATGCTTCCAACTCATCATCTGAGGAGACTCCCTCCTCCCAAGATGATCAATCAGCCGCAGGGGATTCAGATGGCAAGCCCAACGAGGAAGCAGAAGCAGATGTCCATGATGAGTTATGATCAAACCAAAACAGACATACAGGTATCTATACTGATTATTGCCCTCCTAATTCAAAAAACATGGAGAAGCAAATGTAGAATGAAAGGGGTGAGGCAGATGCAGAAAGAAAACAGAGATGAACCCTTTTTTTCTTTTATCTTTTCTAGGAAGGCATTTTTTTTTCTTATCCCACATCCTCTCAGAACAAAGAAGAGAAACAGGAATATGGTTCCCATGTTATACCCAGCTGATGGGGAATTTTGGTTTGTTATATTGAATATTCTGACCATATAA | 2223 | 0.4116 | MGSSSTYAALVYFSAYNAKEYGKTVTVNQFQVKDVSWDPELGGQNMEMRLVEYFADEFNQQVGNGVDVRKFPKAMAKLKKQVKRTKEILNFRSAITCEKFEELCEDLWERSLILVKEVLKNSGLKVDEIYAVELIGGATRVPKLQAKLQEFLGRKDLDRHLDADEAIVLGAALHAANLSDGIKLNRKLGMVDGSSYGLVVELDGPGLLKDESTRQLIVPRMKKLPSKMFRSIIHDKDFDVSLSYEDEDLLPPGVSSPRFAQYAVSGLADASAKYSSRNLSSPIKANLHFSLSRSGILSLDRADAVTEITEWIEVPKVNVTLENSSAASPNISVETSPHNASEDSNENLHTDGRIDNTSNATENQSDKDLGTEKKTEKVVEKTVAPGMPLSKELIAEAKHKLEALDKKDVERRRSAELKNNLEGYIYTTKEKLESSEELEKISTTQERQSFIEKLDEVQEWLYTDGEDATAAEFQERLDLLKSIGDPIFFRLNELTAWPAAMEDARKYLGQLKQIVQDWETKKPWLLKDKIDEVLSDGDKVKNWLEEKEAEQKKTSGFSTPAFTSDEVYEKIFKFQEKVASINRIPKPKPKIEKPTKNETTNNGASSERKQMLPTHHLRRLPPPKMINQPQGIQMASPTRKQKQMSMMSYDQTKTDIQVSILIIALLIQKTWRSKCRMKGVRQMQKENRDEPFFSFIFSRKAFFFLIPHPLRTKKRNRNMVPMLYPADGEFWFVILNILTI* | 741 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi4g0924 | 740 | MobiDBLite | consensus disorder prediction | 351 | 365 | - | - | |
Vvi4g0924 | 740 | Gene3D | Actin; Chain A, domain 4 | 42 | 110 | - | - | |
Vvi4g0924 | 740 | MobiDBLite | consensus disorder prediction | 586 | 609 | - | - | |
Vvi4g0924 | 740 | MobiDBLite | consensus disorder prediction | 324 | 343 | - | - | |
Vvi4g0924 | 740 | MobiDBLite | consensus disorder prediction | 324 | 382 | - | - | |
Vvi4g0924 | 740 | Gene3D | Substrate Binding Domain Of DNAk; Chain A, domain 1 | 186 | 335 | IPR029047 | - | |
Vvi4g0924 | 740 | Gene3D | - | 2 | 158 | - | - | |
Vvi4g0924 | 740 | PANTHER | HSC70CB, ISOFORM G-RELATED | 1 | 607 | - | - | |
Vvi4g0924 | 740 | SUPERFAMILY | Actin-like ATPase domain | 28 | 178 | IPR043129 | - | |
Vvi4g0924 | 740 | SUPERFAMILY | Heat shock protein 70kD (HSP70), C-terminal subdomain | 416 | 499 | IPR029048 | - | |
Vvi4g0924 | 740 | ProSitePatterns | Heat shock hsp70 proteins family signature 3. | 132 | 146 | IPR018181 | - | |
Vvi4g0924 | 740 | Pfam | Hsp70 protein | 29 | 488 | IPR013126 | GO:0005524|GO:0140662 | |
Vvi4g0924 | 740 | Gene3D | - | 389 | 499 | IPR029048 | - | |
Vvi4g0924 | 740 | MobiDBLite | consensus disorder prediction | 366 | 380 | - | - | |
Vvi4g0924 | 740 | FunFam | Heat shock 70 kDa protein 17 | 186 | 333 | - | - | |
Vvi4g0924 | 740 | FunFam | Heat shock 70 kDa protein 4 | 389 | 501 | - | - | |
Vvi4g0924 | 740 | Gene3D | - | 159 | 176 | - | - | |
Vvi4g0924 | 740 | PRINTS | 70kDa heat shock protein signature | 161 | 181 | - | - | |
Vvi4g0924 | 740 | PRINTS | 70kDa heat shock protein signature | 129 | 145 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi4g0924 | Vvi-Chr4 | 14692285 | 14705054 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vvi4g0924 | 24 | 501 | Calmodulin-binding Proteins | AT1G16030 | 25.657 | 3.76e-27 | 115 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi4g0924 | K09486 | - | vvi:100259994 | 1095.11 |