Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0899 ATGGCTTCTCTCACCTGCTCCGCAGCGGACCTCACCCCCCTCCTAGCCGGTGCAGCTACCAACACCACTGCCGTCGCCGACTACCTCTGCTCCCGCTTTGACACCATCGCCGCCAGACTCTCCGACACCACCTACGCCGTCGATTCCACCTACCTTCTCTTCTCTGCCTACCTTGTCTTCGCCATGCAGCTCGGCTTCGCCATGCTCTGCGCCGGTTCCGTCCGCGCTAAAAACACCATGAACATCATGCTCACCAACGTCCTCGACGCTGCTGCCGGAGCCATCTCCTATTACCTCTTCGGCTTCGCTTTCGCCTTTGGCTCTCCCTCCAACGGCTTCATCGGCCGTCATTTCTTTGGCTTAAAGGATTTTCCTTCATCCTCTTTCTACTACACTTTCGACTACAGCTACTTCCTCTACCAATGGGCCTTCGCTATAGCGGCCGCCGGCATCACCAGCGGCTCCATAGCGGAGCGGACCCAGTTCGTGGCTTACCTCATTTACTCTTCTTTCTTGACTGGCTTTGTTTACCCGGTTGTTTCACACTGGTTTTGGTCCCCTGATGGCTGGGCCTGCCCGACCCGGTCCAACGGAGACCTTCTATTCGGATCGGGAGCCATAGATTTTGCCGGGTCGGGCGTGGTTCATATGGTCGGCGGCGTTGCAGGTCTGTGGGGGGCCTTCATTGAAGGACCCAGGATCGGACGGTTCGACAGGACCGGCCGATCTATAACTTTACGAGGGCATAGTGCTTCTTTGGTTGTGCTCGGTTCGTTTTTGCTTTGGTTCGGTTGGTACGGGTTCAACCCCGGTTCGTTCATCACGATATTAAAATCATACGGTGAGAGTAGGGGGTATTATGGTCAATGGAGCGCAGTTGGGAGGACAGCCGTCACAACTACATTGGCTGGGTGCACAGCTGCGCTCACCACCTTATTTGGCAAACGCCTATTGGCGGGTCACTGGAACGTGACAGATGTCTGTAACGGTCTCTTAGGAGGTTTTGCGGCCATCACCTCTGGGTGCTCCGTGGTGGAACCATGGGCGGCGATTGTGTGCGGGTTCGTGGCAGCTTGGGTTCTCATTGGATGCAACAAGCTAGCGGAGAGAGTAGAGTACGATGATCCCCTAGAGGCGGCGCAGCTTCATGGGGGGTGCGGCGCGTGGGGGTTGTTGTTCACGGGACTTTTCGCGACGAAGAAGTATGTGAGAGAGGTGTATGCGGGGCCGTCGGATAGACCGTACGGGTTGCTGATGGGCGGCGGTGGGAAGCTGCTTGCAGCTCAGTTTATTCAGATAATAGTGGTGTCCGGATGGGTGACGGTAACAATGGGCCCATTGTTTTACGCACTGCATAAGCTGAAATTGTTGAGGATCTCTAGCGAAGATGAGATGGCAGGAATGGATCTGACCAGGCACGGTGGATTTGCTTATGTGTACAACGAGGATGATGAGTCGACATTTAAACCGGGTCTTCCCTTGGGGAGGGTGGAGCCTACCAACTCTCGTCAGAACTCACCACCACAACCAGCCGTGTGA 1539 0.5575 MASLTCSAADLTPLLAGAATNTTAVADYLCSRFDTIAARLSDTTYAVDSTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGAISYYLFGFAFAFGSPSNGFIGRHFFGLKDFPSSSFYYTFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSPDGWACPTRSNGDLLFGSGAIDFAGSGVVHMVGGVAGLWGAFIEGPRIGRFDRTGRSITLRGHSASLVVLGSFLLWFGWYGFNPGSFITILKSYGESRGYYGQWSAVGRTAVTTTLAGCTAALTTLFGKRLLAGHWNVTDVCNGLLGGFAAITSGCSVVEPWAAIVCGFVAAWVLIGCNKLAERVEYDDPLEAAQLHGGCGAWGLLFTGLFATKKYVREVYAGPSDRPYGLLMGGGGKLLAAQFIQIIVVSGWVTVTMGPLFYALHKLKLLRISSEDEMAGMDLTRHGGFAYVYNEDDESTFKPGLPLGRVEPTNSRQNSPPQPAV* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0899 512 MobiDBLite consensus disorder prediction 498 512 - -
Vvi4g0899 512 FunFam Ammonium transporter 29 491 - -
Vvi4g0899 512 SUPERFAMILY Ammonium transporter 45 459 - -
Vvi4g0899 512 MobiDBLite consensus disorder prediction 489 512 - -
Vvi4g0899 512 Gene3D Ammonium transporter AmtB like domains 27 491 IPR029020 -
Vvi4g0899 512 Pfam Ammonium Transporter Family 51 478 IPR024041 GO:0008519|GO:0016020|GO:0072488
Vvi4g0899 512 NCBIfam ammonium transporter 48 478 IPR001905 GO:0008519|GO:0016020|GO:0072488
Vvi4g0899 512 PANTHER AMMONIUM TRANSPORTER 20 474 - -
Vvi4g0899 512 ProSitePatterns Ammonium transporters signature. 208 233 IPR018047 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0899 Vvi-Chr4 13963109 13964647 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0899 2 512 Inorganic Solute Cotransporters AT1G64780 77.907 0.0 793
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0899 K03320 K07573 vvi:100263947 1021.15