Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0860 ATGGTGGTGAAGGTGTATGGTTCTGTTAGAGCTGCTTTCCCACAGAGAGTGTTGGCTTGTCTTATAGAGAAAGGAGTAGAGTTTGAGGTTGTGCATATGGACCTCGACTCCGGAGACCAAAAACGACCTCATTTCTTACTTCTTCCCCTTCCCTCCCTCTTCCAACAAAATAATTTATATTTAATTATATAA 192 0.4115 MVVKVYGSVRAAFPQRVLACLIEKGVEFEVVHMDLDSGDQKRPHFLLLPLPSLFQQNNLYLII* 64
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0860 63 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 63 IPR004045 -
Vvi4g0860 63 Pfam Glutathione S-transferase, N-terminal domain 1 46 IPR004045 -
Vvi4g0860 63 Gene3D Glutaredoxin 2 59 - -
Vvi4g0860 63 SUPERFAMILY Thioredoxin-like 2 46 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0860 Vvi-Chr4 11620379 11620570 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0860 1 47 Glutathione S-transferase Gene Family AT5G17220 63.830 4.05e-17 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0860 K00799 - vvi:100232976 81.2629