Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0856 ATGGTGGTGAAGGTGTATGGTGCAGTTATGACTGCATGCCCACAGAGGGTGTTGGCTTGCCTTGTAGAGAAGGGACTGGAGTTTGAGGTTGTCCATGTCGACCTCGACTTCGGCGAGCAAAAACGACCTGAGTTCTTAATTCGTCAGCCTTTTGGGCAAGTTCGAGTGATGGAGGATGGTGATTTCAGGCTTTTCGATTCGAGGGCAATTATAAGATACATTGTGGCCAAGTACGTGGATGAGGGTCCCAACCTAGTGGGAAGGAACTTGGAGGAGAGAAGTCTTGTGGATCAATGGTTAGAAGTGGAGGAAAACAATTTGAACCCTTTAATTTTCACAGTGGTTCTTCAGTTGGTAATCCTACCTCGGATGGGGGAGAAAGGTGACTTGACACTAGTTCGAAACTGCGAACAAAAGCTTGACAAGGTGTTTGATGCGTACGAGCAAAGGCTCTCCAAGAGTTCCTACCTTGGAGGAGATTCATTTACTCTTGCTGATTTGAGTCATCTTCCGGGCATAAGATATTTAGTGAATGAAGTTGGAATAGGGCACTTGATCACTGAGAGGAAGAATGTGAGTGCATGGTGGGAGAACATCTCCAATATGCCTGCTTGGAAGAAAGTCATGAACCTTGCTTCTTGA 642 0.4611 MVVKVYGAVMTACPQRVLACLVEKGLEFEVVHVDLDFGEQKRPEFLIRQPFGQVRVMEDGDFRLFDSRAIIRYIVAKYVDEGPNLVGRNLEERSLVDQWLEVEENNLNPLIFTVVLQLVILPRMGEKGDLTLVRNCEQKLDKVFDAYEQRLSKSSYLGGDSFTLADLSHLPGIRYLVNEVGIGHLITERKNVSAWWENISNMPAWKKVMNLAS* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0856 213 Gene3D Glutaredoxin 2 86 - -
Vvi4g0856 213 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Vvi4g0856 213 FunFam Glutathione S-transferase F2 2 86 - -
Vvi4g0856 213 Pfam Glutathione S-transferase, N-terminal domain 1 75 IPR004045 -
Vvi4g0856 213 SFLD Glutathione Transferase (cytosolic) 4 200 IPR040079 -
Vvi4g0856 213 SUPERFAMILY GST C-terminal domain-like 82 210 IPR036282 -
Vvi4g0856 213 CDD GST_N_Phi 2 77 - -
Vvi4g0856 213 FunFam Glutathione S-transferase F2 87 209 - -
Vvi4g0856 213 CDD GST_C_Phi 91 209 IPR034347 -
Vvi4g0856 213 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 213 IPR010987 -
Vvi4g0856 213 PANTHER GLUTATHIONE S-TRANSFERASE RHO 2 210 - -
Vvi4g0856 213 Pfam Glutathione S-transferase, C-terminal domain 109 203 IPR004046 -
Vvi4g0856 213 Gene3D - 87 209 - -
Vvi4g0856 213 SFLD Main (cytGST) 4 200 - -
Vvi4g0856 213 SUPERFAMILY Thioredoxin-like 2 81 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0856 Vvi-Chr4 11587680 11589283 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0856 1 213 Glutathione S-transferase Gene Family AT3G03190 54.460 1.55e-86 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0856 K00799 - vvi:100263347 429.483