Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0854 ATGGTGATGAAGGTGTATGGCCCAGTGAGGGCTGCATGCCCACAGAGGGTGTTGGCTTGCCTTGTAGAGAAGGGCGTGGAGTTTGAGGTTGTCCATGTCGACCTCGACTCTGGCGAGCAAAAACGGCCTGATTTCCTCCTTCGACAGCCTTTTGGGCAAGTTCCAGTGGTAGAAGATGGCGATTTCAGGCTTTTTGAGTCGAGGGCGATTGTGAGGTACATCGCGGCCAAGTACGCGGAGCAAGGGCCTGACCTCTTGGGAAAAAGCTTGGAGGAGAAAGCGGTAGTTGATCAATGGCTGGAAGTGGAAGCTCACAACTTCAACGAGTTGGTGTACACACTGGTCATGCAGCTAGTGATCCTACCTCGAATGGGTGAGCGGGGGGACTTGGCTTTAGCCCACACTTGTGAGCAGAAGCTGGAAAAGGTGTTTGATGTGTATGAGCAGAGGCTGTCGAAGAGCCGGTACCTTGCAGGAGATTCATTCACTCTCGCTGATCTGAGTCATCTTCCGGCCATCAGATACTTGGTGAAGGAAGCTGGAATGGCGCACTTGGTTACTGAGAGGAAGAGTGTGAGTGCATGGTGGGAGGACATTTCCAACAGGGCTGCTTGGAAAAAAGTCATGGAGCTCGCTGCTTGA 642 0.528 MVMKVYGPVRAACPQRVLACLVEKGVEFEVVHVDLDSGEQKRPDFLLRQPFGQVPVVEDGDFRLFESRAIVRYIAAKYAEQGPDLLGKSLEEKAVVDQWLEVEAHNFNELVYTLVMQLVILPRMGERGDLALAHTCEQKLEKVFDVYEQRLSKSRYLAGDSFTLADLSHLPAIRYLVKEAGMAHLVTERKSVSAWWEDISNRAAWKKVMELAA* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0854 213 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 213 IPR010987 -
Vvi4g0854 213 SFLD Glutathione Transferase (cytosolic) 3 202 IPR040079 -
Vvi4g0854 213 Pfam Glutathione S-transferase, C-terminal domain 114 202 IPR004046 -
Vvi4g0854 213 SUPERFAMILY GST C-terminal domain-like 81 209 IPR036282 -
Vvi4g0854 213 PANTHER GLUTATHIONE S-TRANSFERASE RHO 2 210 - -
Vvi4g0854 213 SFLD Main (cytGST) 3 202 - -
Vvi4g0854 213 CDD GST_N_Phi 2 77 - -
Vvi4g0854 213 CDD GST_C_Phi 91 209 IPR034347 -
Vvi4g0854 213 SUPERFAMILY Thioredoxin-like 1 82 IPR036249 -
Vvi4g0854 213 Gene3D - 87 209 - -
Vvi4g0854 213 FunFam Glutathione S-transferase F2 87 209 - -
Vvi4g0854 213 FunFam Glutathione S-transferase F2 2 86 - -
Vvi4g0854 213 Pfam Glutathione S-transferase, N-terminal domain 1 75 IPR004045 -
Vvi4g0854 213 Gene3D Glutaredoxin 1 86 - -
Vvi4g0854 213 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0854 Vvi-Chr4 11505149 11507244 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0854 1 213 Glutathione S-transferase Gene Family AT5G17220 57.277 1.28e-93 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0854 K00799 - vvi:100232976 426.017