Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0832 ATGTCAAAAGAAGAGGTTGTTCTTTTAGACTTCTGGGCTAGCCCCTTCTGTGGTAGGGTAAAGATTGCACTGGCTGAGAAAGGTGTGGAATATGAAAATAGAGAAGAGGATGTGTTGGGTAGCAAGAGTGAGTTGTTGCTCAATTCAAACCCTATCCACAAAAAGGTTCCTGTGTTGTTACATAATGGAAAGCCTGTGTGTGAGTCCACTGTCATAGTTAATTATATTGATGAGGCCTGGCCTTCTCCACCATTGCTCCCAACTTGTCCATATGAGCGAGCTCGAGCCCGGTTCTGGGGGGACTTCATTGACAAGAAGATATTTGAAGGAGGCGCCAAGATATGGGGAAGCAAAGGAGAGGCACTAGAGGTCGGTAAGAAGGATTTCATAGAGATTTTGAAGCAGCTAGAGGGAACTTTGGGGGAGAAGGATTTCTTTTGTGGTGACAACTTTGGATTTGTTGACATTCTATTGATCCCTTTGACCACCTGGTTCTACGCTTATGAGAAATTTGGGGGTTTTAAGGTTGAGGATGAGTGTCCCAAGTTCTCAGTTTGGGTGAAAAGATGCATGCAAAGAGAGAGCGTGGCAAAAGCTCTTCCAGAGCCAGAGAAGGTCTATGAGGCTGTCGTTATGTTGAGAAAGATGAATGGCATTGAGTAG 663 0.448 MSKEEVVLLDFWASPFCGRVKIALAEKGVEYENREEDVLGSKSELLLNSNPIHKKVPVLLHNGKPVCESTVIVNYIDEAWPSPPLLPTCPYERARARFWGDFIDKKIFEGGAKIWGSKGEALEVGKKDFIEILKQLEGTLGEKDFFCGDNFGFVDILLIPLTTWFYAYEKFGGFKVEDECPKFSVWVKRCMQRESVAKALPEPEKVYEAVVMLRKMNGIE* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0832 220 CDD GST_N_Tau 6 80 - -
Vvi4g0832 220 Gene3D Glutaredoxin 1 88 - -
Vvi4g0832 220 SUPERFAMILY GST C-terminal domain-like 78 216 IPR036282 -
Vvi4g0832 220 SFLD Glutathione Transferase (cytosolic) 2 216 IPR040079 -
Vvi4g0832 220 SFLD Main.3: Omega- and Tau-like 2 216 IPR045073 -
Vvi4g0832 220 FunFam Glutathione S-transferase U20 89 220 - -
Vvi4g0832 220 SUPERFAMILY Thioredoxin-like 6 107 IPR036249 -
Vvi4g0832 220 CDD GST_C_Tau 90 210 IPR045074 GO:0004364|GO:0006749
Vvi4g0832 220 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 9 208 IPR045073 -
Vvi4g0832 220 Pfam Glutathione S-transferase, C-terminal domain 130 194 IPR004046 -
Vvi4g0832 220 FunFam Tau class glutathione S-transferase 1 88 - -
Vvi4g0832 220 Gene3D - 90 220 - -
Vvi4g0832 220 Pfam Glutathione S-transferase, N-terminal domain 6 78 IPR004045 -
Vvi4g0832 220 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 219 IPR010987 -
Vvi4g0832 220 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 84 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0832 Vvi-Chr4 10795507 10796386 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0832 5 215 Glutathione S-transferase Gene Family AT1G78380 63.679 8.09e-94 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0832 K00799 - vvi:100242734 458.759