Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi4g0812 | ATGGAGTCCAGAGGCTTGAGGCCATTGATGGCAGTGGTAATATGGTGGTGGTGGCTGATAAGCCCAGCTGTTTCAGATCCACAAACAAACCTGCTCAACCAGGGATGCAGCACATACAACGTCACCAACCTATCAGACTTCTACACCAACCTCAACGCCACGTTCTCTGACCTCGAAACGCAGTTGAACAATAACAAGCTCTTCGACACAGCAGAGAGAACGAGGAGTGGAGACTCTGTGTACGCCATGGTGCAGTGCAGAAACTACATGTCCGCTGAGGACTGCTTGGCTTGCTTCGCCGATGCTCAGTCGCTCATCCGCAGATGCGGTGCTGCCAACGGCGCTCGCGTCATCTACGATGGCTGCTTCCTCAGGTATGAGAGCAGCAGCTTCTACGACCAAACCACTCTCGCTGGAAATGCTCCAATTTGTGGGAACGACACGGCATCGCAGGTGACTGCTTTTCAATCAGCAGTAGAAGGACTGATAGCAGATCTTGAAGTTGCAACACCCAGGATTAATCGTTTCTATGCGGCATATAAAATGGAAGTGGTTGGTGGTGGTGGTGCAACAGTGTATGGGGTGGCACAATGTGCTGAAACAGCCAGTCAGACTGCTTGCCAAGAATGCTTGCAAGTGGCAAAGAGCAATATAAACAGTTGTCTTCCCAGTAAAAACGGCCGGGCTATTGATGCTGGATGTTTCCTGAGGTACTCAGATGTGGCCTTCTTTGCTGACAACCAGACAACTAATATCACACCCTTCTTACAAAAAGGAGGTTCAAACAAGAAGAAAGCGATTATTGGAGGAGTGGTTGGAGGTGTAGGTATTGTTTTGATTATCGTAGTTTTGCTTTTATGGTATCGGACCTATCGGTCATCAAGAAAGGCAAAGCTGGCTTCTACAGGTGATTTATTAGGTGTGACAGAGTTGCAAGGCCCAGTGAATTACAGCTACAATGATTTGAAAACTGCAACCAGGATGTTCAGTGAAGAAAATAAACTTGGAGAGGGAGGATTTGGTGACGTCTATAAGGGTCATTTGAAGAATGGGAAAATTGTTGCTGTTAAGAAACTATTTATAGGTCAAACAGACGGGGCAAAGGCAAATTTCGAGAGTGAAGTAAAGCTTATAAGTAATGTTCATCATCGCAATCTCATCCGTCTTCTTGGATGTTGTAGCAAAAAATCAGAATTGCTTCTTGTGTACGAGTACATGGCAAATAGCAGCCTGGATAAATTCTTATTTGGAGAAAAGCGAGGGGCTCTCAACTGGAAACAACGTTTGAATATAATTGTTGGTATAGCGAGGGGTCTTGCGTATTTACATGAGGAGTTCCATGTGTGTATCATACACCGAGACATAAAACCTAACAATGTTCTTCTTGATGACGATTTCCAACCCAGAATTGCAGATTTTGGATTGGCAAGGCTTCTACCTGAGGACCAGACTCATGTTAGCACCAAATTTGCTGGAACATTGGGTTACACTGCACCTGAATATGCAATCCATGGACAGCTATCTGCGAAGGCTGATACCTACAGCTATGGTGTTGTAGTCCTTGAAATCATAAGCGGCCAAAGGTGCAACGAGATGAAGGTTGAACCTGTCACTGAATTCTTGCTTGAACGGGCATGGAAACTGTACGAGAATGACAATCACTTGGAGTTGGTGGATGAGAGCTTAGACCCTGAGGAATATGATGCAGAAGAAGTGAAGAAAATCATAGAGATTGCTCTGTTGTGCACTCAATCATCAGCTTCCATGAGGCCCACAATGTCTGAAATTGTTGTTATGCTATACAGCAAGGACGCACTTCAGCATGGTCCCCCAACCAGGCCCACCTTCATTTCTTCCAATAACAGAGCTGGCGGAGATACTTCCGCGTCCACTTGGGACTACGCTTCCAATGCCACTGCCTCTTTTTCTGGGGTCTCAGGTCGTTAA | 1947 | 0.4592 | MESRGLRPLMAVVIWWWWLISPAVSDPQTNLLNQGCSTYNVTNLSDFYTNLNATFSDLETQLNNNKLFDTAERTRSGDSVYAMVQCRNYMSAEDCLACFADAQSLIRRCGAANGARVIYDGCFLRYESSSFYDQTTLAGNAPICGNDTASQVTAFQSAVEGLIADLEVATPRINRFYAAYKMEVVGGGGATVYGVAQCAETASQTACQECLQVAKSNINSCLPSKNGRAIDAGCFLRYSDVAFFADNQTTNITPFLQKGGSNKKKAIIGGVVGGVGIVLIIVVLLLWYRTYRSSRKAKLASTGDLLGVTELQGPVNYSYNDLKTATRMFSEENKLGEGGFGDVYKGHLKNGKIVAVKKLFIGQTDGAKANFESEVKLISNVHHRNLIRLLGCCSKKSELLLVYEYMANSSLDKFLFGEKRGALNWKQRLNIIVGIARGLAYLHEEFHVCIIHRDIKPNNVLLDDDFQPRIADFGLARLLPEDQTHVSTKFAGTLGYTAPEYAIHGQLSAKADTYSYGVVVLEIISGQRCNEMKVEPVTEFLLERAWKLYENDNHLELVDESLDPEEYDAEEVKKIIEIALLCTQSSASMRPTMSEIVVMLYSKDALQHGPPTRPTFISSNNRAGGDTSASTWDYASNATASFSGVSGR* | 649 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi4g0812 | 648 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 450 | 462 | IPR008271 | GO:0004672|GO:0006468 | |
Vvi4g0812 | 648 | FunFam | Cysteine-rich receptor-like protein kinase 2 | 406 | 608 | - | - | |
Vvi4g0812 | 648 | Gene3D | - | 140 | 243 | IPR038408 | - | |
Vvi4g0812 | 648 | Gene3D | - | 28 | 131 | IPR038408 | - | |
Vvi4g0812 | 648 | FunFam | Cysteine-rich receptor-like protein kinase 2 | 28 | 131 | - | - | |
Vvi4g0812 | 648 | FunFam | Cysteine-rich receptor-like protein kinase 2 | 139 | 243 | - | - | |
Vvi4g0812 | 648 | CDD | STKc_IRAK | 335 | 600 | - | - | |
Vvi4g0812 | 648 | SMART | serkin_6 | 329 | 602 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi4g0812 | 648 | ProSiteProfiles | Protein kinase domain profile. | 329 | 602 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi4g0812 | 648 | Pfam | Protein tyrosine and serine/threonine kinase | 332 | 599 | IPR001245 | GO:0004672|GO:0006468 | |
Vvi4g0812 | 648 | ProSiteProfiles | Gnk2-homologous domain profile. | 29 | 131 | IPR002902 | - | |
Vvi4g0812 | 648 | FunFam | Cysteine-rich receptor-like protein kinase 2 | 294 | 405 | - | - | |
Vvi4g0812 | 648 | ProSitePatterns | Protein kinases ATP-binding region signature. | 335 | 358 | IPR017441 | GO:0005524 | |
Vvi4g0812 | 648 | SUPERFAMILY | Protein kinase-like (PK-like) | 311 | 602 | IPR011009 | - | |
Vvi4g0812 | 648 | ProSiteProfiles | Gnk2-homologous domain profile. | 137 | 243 | IPR002902 | - | |
Vvi4g0812 | 648 | Gene3D | Phosphorylase Kinase; domain 1 | 306 | 405 | - | - | |
Vvi4g0812 | 648 | Pfam | Salt stress response/antifungal | 36 | 128 | IPR002902 | - | |
Vvi4g0812 | 648 | Pfam | Salt stress response/antifungal | 144 | 240 | IPR002902 | - | |
Vvi4g0812 | 648 | PANTHER | CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 | 81 | 624 | - | - | |
Vvi4g0812 | 648 | Gene3D | Transferase(Phosphotransferase) domain 1 | 406 | 609 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi4g0812 | Vvi-Chr4 | 10121389 | 10126073 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vvi4g0812 | 26 | 648 | Receptor kinase-like Gene Family | AT1G70520 | 37.480 | 1.09e-125 | 384 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Vvi4g0812 | PK_Tyr_Ser-Thr | 1.2e-50 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi4g0812 | - | - | vvi:100241075 | 1272.69 |