Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0808 ATGATTGAGAAAACTATTGAGAGGAGACAGAAGAGGATGATCAAGAATTGGGAATCTGCTACCCGTTCAAGGGCCAGGAAGCAGGCTTACACAAATGAACTGGAGAACAAAGTTTCACGTCTGGAAGAGGAAAATGAAAGGCTAAGGAAACGAAAGGTATATATTTTCTTCTAA 174 0.4023 MIEKTIERRQKRMIKNWESATRSRARKQAYTNELENKVSRLEEENERLRKRKVYIFF* 58
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0808 57 Gene3D - 6 54 - -
Vvi4g0808 57 SUPERFAMILY Leucine zipper domain 8 51 IPR046347 GO:0003700|GO:0006355
Vvi4g0808 57 SMART brlzneu 4 55 IPR004827 GO:0003700|GO:0006355
Vvi4g0808 57 Coils Coil 24 51 - -
Vvi4g0808 57 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 11 26 IPR004827 GO:0003700|GO:0006355
Vvi4g0808 57 Pfam bZIP transcription factor 8 51 IPR004827 GO:0003700|GO:0006355
Vvi4g0808 57 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 6 56 - -
Vvi4g0808 57 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 2 51 IPR043452 GO:0003700|GO:0045893
Vvi4g0808 57 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 6 51 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0808 Vvi-Chr4 9842300 9842587 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0808 1 55 bZIP Transcription Factor Family AT2G41070 80.000 6.15e-23 85.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vvi4g0808 bZIP_1 1.6e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0808 K14432 - jre:109007259 86.6557