Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0792 ATGGACTACTACTACTCCTCCTCCTCCTCTCCTCCAAACCCTCACCCCAACCCCAGCCCTGACCCTAATTGCGCTTCCCAGTTTGAATTCCTTTACCATTATCTCATGCTCGAAGATGGCTCTGAGGAAGATTCATGCTCGCAGACTACGGCGGCAGCATCGGCCGTAACAGTTACAGGTACTGGCCATATTGATCAGCTGATCCACACTGCAACTCCTACACATGATGGGGTGAGGAGATCAAAGGAGAGTGATGATGGGGCTCGAGTTGTTGCTTTTAGGACGAAATCAGAGCTGGACGTCATGGATGATGGATTTAAATGGAGGAAGTATGGGAAAAAGATGGTGAAGAGCAGCCCAAATCCAAGGAACTACTATAGATGTTCAAGTGGAGACTGCCAAGTGAAGAAGAGGATAGAAAGGGACATAGAAGATTCAAGCTATGTGATAACTACATATACAGGAATCCATAACCATCCAATCCCTGGTGTGGGGTACTACAACCAGATGCCTCTCATGGTTCCTTATGACTATGACTGGACTTTACAAGCTTCCTCCCAATCTCCTTTTTCTTGA 576 0.4688 MDYYYSSSSSPPNPHPNPSPDPNCASQFEFLYHYLMLEDGSEEDSCSQTTAAASAVTVTGTGHIDQLIHTATPTHDGVRRSKESDDGARVVAFRTKSELDVMDDGFKWRKYGKKMVKSSPNPRNYYRCSSGDCQVKKRIERDIEDSSYVITTYTGIHNHPIPGVGYYNQMPLMVPYDYDWTLQASSQSPFS* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0792 191 SUPERFAMILY WRKY DNA-binding domain 94 162 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vvi4g0792 191 ProSiteProfiles WRKY domain profile. 97 162 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vvi4g0792 191 SMART WRKY_cls 102 161 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vvi4g0792 191 MobiDBLite consensus disorder prediction 1 23 - -
Vvi4g0792 191 Pfam WRKY DNA -binding domain 103 160 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vvi4g0792 191 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 15 163 IPR044810 GO:0003700
Vvi4g0792 191 FunFam WRKY transcription factor 57 88 162 - -
Vvi4g0792 191 Gene3D WRKY domain 86 163 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0792 Vvi-Chr4 9399944 9400908 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0792 17 179 WRKY Transcription Factor Family AT5G64810 47.590 1.94e-41 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vvi4g0792 WRKY 2.2e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0792 - - vvi:100244369 369.392