Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0767 ATGTTAACAGTTCAACAGCTCAACCCAACTATCACTGATATAAATGAGCTCATAAAGAAGGGGGAGCGTGTAGGTTACCAATATGGCTCTTTCGTTTATGAATTCTTGATCAAGTCGATGAAATTTGATGAGTCCAATCTTGTAAAGTATGAGTCACCAGAAGAACTGGATGAATTATTTTCAAAAGGTGGAATTACTGCTGCATTTGATGAAATCCCTTACATGAAGATTTTCCTTGCAAAATATTGCTCCAAATACACTGCAGTTGGACCAACATACAAGTTTGATGGGTTTGGATTTGTCTTTCGAAAGGGTTCACCCCTTGTAGCGGATGTTTCAAGGAAAGTTTTAAGCGTGACCGAGGGAGCTAAATTGTTAGAATTTGAGAAGGCATGGTTTGGGCAAACAACCAGTTGTCCAGAGCTCACCAGCTCAGTTTCTTCAAACAGTATCGGCCTTAATAGCTTTTGGGGCCTATTCCTTATTGCTGGAGTCGCTTCATTTGTAGCTCTCGTTGCATGCATCACCACATTCCTTTATGAAAATAGAAACGCCTTAATAAACTTGAATCCCCCATCTTCCTTATGGAGAAAAATTAAAGCCATGGCTACACGCTTTGATGACAAAGATCCCAGGTCTCATACCTTTAGAAAAAGTGATCAACTTCCAGACAAGGGGCATCAAAGCCATGGATGCAGTTACAGCCTCGCCAGCTACACCAACTTCCCTCCAAGTCCATCAAGCCTTCTGATCCCAACACACAGCGATTTTGCCTTCTTTGGAGAACAAGGAACACCTTCTTCTGGACATGGTGATCCAGTCTGTCCAAATCGGCCGATGTCTCCTCACATATTGTTTGAATATGAGCTTGCTAATTTAAATCACGAGCAAACAAGACCGCCTGTAATTGAATAA 915 0.4164 MLTVQQLNPTITDINELIKKGERVGYQYGSFVYEFLIKSMKFDESNLVKYESPEELDELFSKGGITAAFDEIPYMKIFLAKYCSKYTAVGPTYKFDGFGFVFRKGSPLVADVSRKVLSVTEGAKLLEFEKAWFGQTTSCPELTSSVSSNSIGLNSFWGLFLIAGVASFVALVACITTFLYENRNALINLNPPSSLWRKIKAMATRFDDKDPRSHTFRKSDQLPDKGHQSHGCSYSLASYTNFPPSPSSLLIPTHSDFAFFGEQGTPSSGHGDPVCPNRPMSPHILFEYELANLNHEQTRPPVIE* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0767 304 Pfam Bacterial extracellular solute-binding proteins, family 3 9 135 IPR001638 -
Vvi4g0767 304 Gene3D - 84 141 - -
Vvi4g0767 304 Gene3D - 1 83 - -
Vvi4g0767 304 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 1 213 IPR015683 -
Vvi4g0767 304 MobiDBLite consensus disorder prediction 209 225 - -
Vvi4g0767 304 SMART GluR_14 1 135 IPR001320 GO:0015276|GO:0016020
Vvi4g0767 304 SUPERFAMILY Periplasmic binding protein-like II 3 139 - -
Vvi4g0767 304 MobiDBLite consensus disorder prediction 209 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0767 Vvi-Chr4 8731863 8732842 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0767 2 251 Ion Channels AT2G29110 45.600 1.68e-66 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0767 K05387 - vvi:100245134 620.157