Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0754 ATGGCCATGTCACGGAACACAACAATACCGGTTAAAGTGGGAGTGGTTCTTGACATGGATACATGGCTGGGGAAGATGGGCTTGAGCTGCATCTCCATGGCCCTCTCAGACTTCTATGCCTCTCATGGGCACTACAAGACTAGGCTGGTTCTGGAAATCAGAGATTCCAAAAGAGATGTTGTGGGTGCAGCTGCAGCAGATCCTAGCACTAACATGACGGAGGTCACTGGATTTTCCATATCAGTCTTCGATGAAGTGATGGCAGCATTAACATATCCTGTTCCTTATGAGTACATTCCCTTCAAGATGCCTGATGGCAATCTAGCCGGTGATTACAACAATTTGATTTATCAAGTATATCTCCAGAAGTATGATGCTGTGGTGGGAGATACTTCTATCCTAGCGAACAGGTCGTTGTATACTTTACACTACCTTACATAG 441 0.4535 MAMSRNTTIPVKVGVVLDMDTWLGKMGLSCISMALSDFYASHGHYKTRLVLEIRDSKRDVVGAAAADPSTNMTEVTGFSISVFDEVMAALTYPVPYEYIPFKMPDGNLAGDYNNLIYQVYLQKYDAVVGDTSILANRSLYTLHYLT* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0754 146 PANTHER OS06G0188250 PROTEIN 1 69 - -
Vvi4g0754 146 Gene3D - 49 142 - -
Vvi4g0754 146 SUPERFAMILY Periplasmic binding protein-like II 73 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0754 Vvi-Chr4 8461866 8466086 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0754 25 66 Ion Channels AT2G24710 54.762 5.36e-09 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0754 K05387 - vvi:100260624 130.954