Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0741 ATGTTCCAAGAACAAAAGAGCTCGAAAATTTCAGAGTCCGATGGAAAAGGAAGTTCCGGCAAGATCATCCCTGAGCTGAACATTTTTGGATTATGGGCTTATGACGCTGCTTCTGCACTAGCCATGGCTGTTGAGAAAGTTGGGGCAACAAACTTCAGCTTCCAAAAGACTAATATTTCCAGCAATTCGATGGTTCTTGACACCATTAGAGTCTCTCAAATTGGTACAAATCTTCTCCAGTCACTGTTAAGTACCAAATTGAAAGGTCTCAGTGGATATTTTCAAATATTTGATGGGCAACTTCACTCGACAGCCTTTCAGATAGTTAATGTGATTGGGAAAGGGGAAAGAGGGGTAGGATTTTGGACTCCGAAAAATGGAATTATAAGAAGACTGAATTTCTCACACACAAATTCAAAGACATATTCCACTTCTAAGGAAAACCTAGGAACAATTATATGGCCTGGAGAACCTACTTATGTCCCTAAAGGTTGGGTGCTTCCAGTAAATGAGAAGAAGTTGAGAATAGGAGTTCCAGTGAAGAATGGTTTTAGTGAATTTGTAAATGTGACATGGGATCCTATTGTGATCCATGCAACGATTTAA 606 0.396 MFQEQKSSKISESDGKGSSGKIIPELNIFGLWAYDAASALAMAVEKVGATNFSFQKTNISSNSMVLDTIRVSQIGTNLLQSLLSTKLKGLSGYFQIFDGQLHSTAFQIVNVIGKGERGVGFWTPKNGIIRRLNFSHTNSKTYSTSKENLGTIIWPGEPTYVPKGWVLPVNEKKLRIGVPVKNGFSEFVNVTWDPIVIHATI* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0741 201 PANTHER OS06G0188250 PROTEIN 19 120 - -
Vvi4g0741 201 Pfam Receptor family ligand binding region 29 112 IPR001828 -
Vvi4g0741 201 FunFam Glutamate receptor 28 172 - -
Vvi4g0741 201 SUPERFAMILY Periplasmic binding protein-like I 26 165 IPR028082 -
Vvi4g0741 201 Gene3D - 33 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0741 Vvi-Chr4 8331134 8331739 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0741 25 195 Ion Channels AT2G24720 49.708 2.06e-52 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0741 K05387 - vvi:100855255 293.508