Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0702 ATGGGATATATTAGTTCGGTTTTGTCATCCTCAAGTCAAGTTCACGTTGATGATGGGCCTGTTAGCGGTGGCGGTCTCAGTCATAATGGGAAGTTCAGCTACGGATATGCTAGTTCTCCCGGGAAAAGGTCTTCAATGGAAGATTTTTATGAGACAAGAATTGATGGTGTTGAAGGAGAGATAGTTGGCCTTTTTGGAGTCTTTGATGGTCATGGAGGTGCTCGAGCAGCTGAATATGTTAAACAAAACCTTTTTAGTAATTTGATCAGGCATCCAAAGTTCATTTCTGATACAAAATCAGCTATAGCTGATGCATACAAGCACACAGACTCAGAATTTCTGAAATCAGAAAATAATCAGAATAGAGATGCTGGATCAACTGCCTCCACCGCTATCCTTGTTGGTGACCGTTTGCTGGTTGCAAATGTTGGGGACTCCAGAGCTGTTATCTGCAGGGGTGGTAATGCCATTGCTGTTTCTCGAGATCACAAGCCAGACCAAACTGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAGGAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAGAGGCTGATGCAGGAAGCATATCAGAGAGGCAGTGCAGATAACATTACCTGTGTTGTTGTGCGTTTCTTGGCCAACCAAGGGGGTTCGTCCCTTTCCAGCCCCGCATAA 879 0.463 MGYISSVLSSSSQVHVDDGPVSGGGLSHNGKFSYGYASSPGKRSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKQNLFSNLIRHPKFISDTKSAIADAYKHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKIDSSLEFLILASDGLWDVVTNEEAVAMIKPIPDPEEAAKRLMQEAYQRGSADNITCVVVRFLANQGGSSLSSPA* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0702 292 FunFam probable protein phosphatase 2C 59 25 283 - -
Vvi4g0702 292 SMART PP2C_4 23 277 IPR001932 -
Vvi4g0702 292 MobiDBLite consensus disorder prediction 1 17 - -
Vvi4g0702 292 PANTHER PROTEIN PHOSPHATASE 27 278 IPR015655 GO:0004722|GO:0006470
Vvi4g0702 292 MobiDBLite consensus disorder prediction 1 22 - -
Vvi4g0702 292 SUPERFAMILY PP2C-like 28 279 IPR036457 -
Vvi4g0702 292 ProSitePatterns PPM-type phosphatase domain signature. 64 72 IPR000222 GO:0043169
Vvi4g0702 292 CDD PP2Cc 32 279 IPR001932 -
Vvi4g0702 292 SMART PP2C_SIG_2 44 279 IPR001932 -
Vvi4g0702 292 Gene3D - 25 283 IPR036457 -
Vvi4g0702 292 ProSiteProfiles PPM-type phosphatase domain profile. 33 279 IPR001932 -
Vvi4g0702 292 Pfam Protein phosphatase 2C 62 272 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0702 Vvi-Chr4 7644161 7650000 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0702 1 285 PP2C-type Phosphatase Gene Family AT4G31750 92.632 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0702 K17506 - vvi:100251928 576.63