Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0679 ATGACAGCTTGGAAACCAAAAGGCCAAAGGTTTGCGGTTGTTCATGGGGGGAGCCTAGGGCCTGATGTAAGTTTTTACTCGATGCGTAGTGGCGGCAATGCAGGCCAGGTCTCGAAACCCACTGCTCTCAAAGGGAAGCAGGCAAATGCTCTTTTCTGGTCTCCTGCTGGTCGCTATATCATACTTGCAGGGCTGAAGGGATTCAATGGACGGTTGGAATTTTACAATGTTGATGAGCTTGAAACCATGGCGACAGCTGAGCATTTCATGGCTACGCATATTGAATGGGATCCCACAGGATGA 303 0.495 MTAWKPKGQRFAVVHGGSLGPDVSFYSMRSGGNAGQVSKPTALKGKQANALFWSPAGRYIILAGLKGFNGRLEFYNVDELETMATAEHFMATHIEWDPTG* 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0679 100 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 EIF3 -RELATED 3 100 IPR011400 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Vvi4g0679 100 Pfam Eukaryotic translation initiation factor eIF2A 2 100 IPR013979 -
Vvi4g0679 100 SUPERFAMILY Putative isomerase YbhE 3 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0679 Vvi-Chr4 7177296 7177598 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0679 3 100 Eukaryotic Initiation Factors Gene Family AT5G25780 77.551 1.46e-50 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0679 K03253 - vvi:100244090 178.333