Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0656 ATGAGAAAAAAAAAAAAGGGAAAATTAAGGGAACAAAAGGGTTTTTCTCATCTTGAGGGCGCCTCTCTTTCGTTCTCTCTTCGCAGCTGCGCAGAGAGAGGTGAGGTATACACAGGTTGGGAGAGAAAGTCCAGAGAGGCTGACTCTCCTTTCTCTCTATATTCGAACCCTATTCCTACTCTATCTCTCTCTATCTCTCTCTGTGTTCTCTCTCTGTGCCCACTTTCCGTTATCTTTTTCTCTCTACAACTCAACTCAGGATTCGCATCTCGAGTTATGCAGCAGGCAGATCAGACCGTCATAAGCTTGCGTCCAGGTGGTGGTGGTGGTCCTCGCGGCACCAGATTCCTCGCCTCTCGCTTCGACTCTTCCTCATCGTCTTCATCTGATGCTCAGCCTCTTCGCCCTCACGGCGGTCTCGCTCCATCGTCGTTCCTCAAGAGTGGAGACTTGCGGTTTGAAGGTCGTGAACGTGTCCGGTACACCCGAGACCAGCTGTTGCAACTTAGGGAGGTTGTTGATATCCCTGAGAATATTTTGAAGATTAAACAAGAGATTGAGTCTGAGTTTGGTGGTGAAGACCAAAACTGGAATCGTGGAGATGGCAACGTTCAACCCCAATCCCAAAGTCGTTATGCTGAGCCAGACAACCGTGACTGGCGTGGCCGATCTTCACAGTTGCCTGCCACTGGAGAGGATAGATCCTGGGAATCAATTCGAGACAATAAGGAGTTACCCAGTCGATTTGAGTCAAGGACTCAGGACTTGAATAACCGTCAAGACCAACTAAACTCCCAGTTTGTGAGGGCTCAACTATCTTCTAACCAAGGGGTAGGGCCTGCTCCTGTTCTTGTCAAGGCTGAAGTGCCATGGTCTGCTCGAAGGGTGAGTCTATCTGAGCAGGAACGTGTTCTGAAGACAGTGAAGGGCATACTGAACAAATTGACCCCGGAGAAGTTTGATGTTCTCAAAGGTCAGCTGATTGAATCTGGAATAACCACCCATGATATTTTAAAGGGTGTTATCTCGCTTATTTTTGATAAGGCTGTGCTGGAGCCCACATTTTGTCCCATGTATGCTCTTCTATGCTCAGACCTTAATGAGAAGCTGCCGCCATTTCCCTCTGAAGAACCTGGTGGGAAAGAAATTACCTTTAAGCGAATCCTCCTGAATAATTGCCAAGAGGCATTTGAAGGTGCTGACAGCCTGAGGGCAGAAATTGGGCTGTTGACTGCCCCTGAGCAAGAAGTGGAACGGAGGGAAAAAGAAAGAAAAGTGAAGCTCCGAACTCTTGGAAACATTCGCCTTATTGGTGAACTTCTTAAGCAGAAGATGGTGCCTGAAAAGATTGTTCACCACATTCTTCAGGAGCTTTTGGGACATGATGGTAAAACTTGCCCAGCTGAGGAGAATGTGGAGGCTATATGTCAATTTTTTAATACTATTGGAAAGCAGCTGGACGAGAGCCAAAAATCTCGGCGAGTTAATGATCTCTACTTCAGCAGGTTGAAGGAGCTGACGACAAACCCCCAACTTGCACCACGGTTGAGGTTCATGGTTCGTAATGTTCTTGATCTGCGGGCGAACAACTGGGTCCCTAGACGTGAAGAGGTGACAGCTAAAACCATCACTGAAATTCATTCAGAGGCAGAGAAGAATCTAGGGTTGCGTCCAGGTGCAACTGCGAGCATGAGAAATGGTCGTAATACAGGGGCACTTGGTGGTATGGGCCCTGGAGGCTTCCCCATTTCTAGACCTGGTTCTGGGGGTATGATGCCTGGAATGCCTGGGACCAGGAAGATGCCTGGAATGCCTGGGCTTGATACTGATAACTGGGAGGTTCCTCGAAACCGTTCAATGCCAAGGGCTGATGGTGTTGGAGCCCAGTCTGCCTTGCGTGTCCAGTCAGCTTTAATCTCCAAACCAGGGCCAATCAATTCAAAACTTCTACCCCAGGGCAGTGGGGGTTTCATAAGTGGGAAGACAAGTGCCTTATTGCAGGGTAGTTCTGCATCGACATCTCAACAGCCTTCCAGCTTTGTTTTGGGAGTTGAGCCTATTAGTCAAACCCCTAAGCCTGTTTCTCAGGCAGCACCTGTTCGTACTCCTGAGAAACCACAGGCTGCTGCACCAAGATCAAATCCTGTTGATCTTCGTAGAAAAACTGTCTCCCTTCTGGAGGAATATTTCAGTGTTCGAATTCTTGATGAAGCATTACAGTGTGTTGAGGAGCTGAAATCTCCTGCATATCACCCTGAGGTTGTTAAAGAAGCTGTTAGCCTTGCCCTGGAAAAGAGTCCACCTTGTGTAGAACCAGTCATAAAGCTTCTTGTGTACTTGTTCAATAAAAATGTTTTGCTGGCTAGGGATTTAGGGACTGGATGTCTCCTCTATGGCTCACTGTTGGATGATGTTGGCATTGATTTACCAAAAGCACCAAATAACTTCGGTGAGGTTCTTGGGAAGCTGGTTTTGGCCGGGGGTTTAGACTTCAAGGTGGTGAAGGAGGTCCTGGAGAAGGTGGAAGATGACAGGTTCCAGGCAGCCATCTTTGATGCTGTCATGAGCGGCATTAGCTCAGACCCTTTGGGGCAAGGATTGATGGAAAAACATAGACTTGATATCCAGGACTGCAAGAGTTTGCTTGGTTGA 2652 0.4793 MRKKKKGKLREQKGFSHLEGASLSFSLRSCAERGEVYTGWERKSREADSPFSLYSNPIPTLSLSISLCVLSLCPLSVIFFSLQLNSGFASRVMQQADQTVISLRPGGGGGPRGTRFLASRFDSSSSSSSDAQPLRPHGGLAPSSFLKSGDLRFEGRERVRYTRDQLLQLREVVDIPENILKIKQEIESEFGGEDQNWNRGDGNVQPQSQSRYAEPDNRDWRGRSSQLPATGEDRSWESIRDNKELPSRFESRTQDLNNRQDQLNSQFVRAQLSSNQGVGPAPVLVKAEVPWSARRVSLSEQERVLKTVKGILNKLTPEKFDVLKGQLIESGITTHDILKGVISLIFDKAVLEPTFCPMYALLCSDLNEKLPPFPSEEPGGKEITFKRILLNNCQEAFEGADSLRAEIGLLTAPEQEVERREKERKVKLRTLGNIRLIGELLKQKMVPEKIVHHILQELLGHDGKTCPAEENVEAICQFFNTIGKQLDESQKSRRVNDLYFSRLKELTTNPQLAPRLRFMVRNVLDLRANNWVPRREEVTAKTITEIHSEAEKNLGLRPGATASMRNGRNTGALGGMGPGGFPISRPGSGGMMPGMPGTRKMPGMPGLDTDNWEVPRNRSMPRADGVGAQSALRVQSALISKPGPINSKLLPQGSGGFISGKTSALLQGSSASTSQQPSSFVLGVEPISQTPKPVSQAAPVRTPEKPQAAAPRSNPVDLRRKTVSLLEEYFSVRILDEALQCVEELKSPAYHPEVVKEAVSLALEKSPPCVEPVIKLLVYLFNKNVLLARDLGTGCLLYGSLLDDVGIDLPKAPNNFGEVLGKLVLAGGLDFKVVKEVLEKVEDDRFQAAIFDAVMSGISSDPLGQGLMEKHRLDIQDCKSLLG* 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0656 883 SMART ma3_7 718 830 IPR003891 -
Vvi4g0656 883 SMART if4_15 305 530 IPR003890 GO:0003723|GO:0005515
Vvi4g0656 883 MobiDBLite consensus disorder prediction 191 243 - -
Vvi4g0656 883 Gene3D - 296 531 - -
Vvi4g0656 883 MobiDBLite consensus disorder prediction 102 143 - -
Vvi4g0656 883 SUPERFAMILY ARM repeat 713 871 IPR016024 -
Vvi4g0656 883 MobiDBLite consensus disorder prediction 118 133 - -
Vvi4g0656 883 FunFam Eukaryotic translation initiation factor isoform 4G-2 296 531 - -
Vvi4g0656 883 Gene3D - 712 873 - -
Vvi4g0656 883 MobiDBLite consensus disorder prediction 198 213 - -
Vvi4g0656 883 Pfam MA3 domain 718 830 IPR003891 -
Vvi4g0656 883 MobiDBLite consensus disorder prediction 557 593 - -
Vvi4g0656 883 SUPERFAMILY ARM repeat 298 533 IPR016024 -
Vvi4g0656 883 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 132 881 IPR045208 GO:0003743
Vvi4g0656 883 ProSiteProfiles MI domain profile. 717 839 IPR003891 -
Vvi4g0656 883 MobiDBLite consensus disorder prediction 690 715 - -
Vvi4g0656 883 FunFam Eukaryotic translation initiation factor isoform 4G-2 711 873 - -
Vvi4g0656 883 Pfam MIF4G domain 305 530 IPR003890 GO:0003723|GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0656 Vvi-Chr4 6768903 6777086 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0656 93 881 Eukaryotic Initiation Factors Gene Family AT5G57870 61.917 0.0 950
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0656 K03260 - vvi:100250837 1499.57