Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0654 ATGGCGGATCAATCTACCGATTCGAATCGGAAAACTCGAGTCTACCATCCATACCAAGACCTCCAGGTCCCCATCCAAAACCTCTACAACCTTCCCACCTCTCCCGAGTACCTCTTCGATGAAGAATCGCTTCATCAACGCCGCTCTTGGAGCGAGAATCTGCAATACTATACGGGGTCGGGTTACCTTTCCGGAGCCATAATCGGTGGCGCCAAGGGCTCCATCGAAGGGATCAGGGCGGCGGAGGCCGGCGACACGCTCAAACTCCGAGTCAACCGGGTTCTCAACTCCGGCGGCCAAACGGGTCGGAGGTTCGGCAACTCGATGGGCGTTCTTGGCCTTATTTTTTCCGGGTTGGAGAGCGGAATGATACACTGGAGAGACACCGATGATATGCTCAACAGCGTCTTCGCTGGTTTGGGCACCGGCGCTCTGTATCGAGCGGCTGCGGGGCCGCGCTCCGCCGTGATCGCTGGTGCTATCGGAGGTTTGGCTGCTGGCGCTGCCGTGGCCGGTAAGCAGGTCATGAAGCGATATGTTCCCATATGA 549 0.5774 MADQSTDSNRKTRVYHPYQDLQVPIQNLYNLPTSPEYLFDEESLHQRRSWSENLQYYTGSGYLSGAIIGGAKGSIEGIRAAEAGDTLKLRVNRVLNSGGQTGRRFGNSMGVLGLIFSGLESGMIHWRDTDDMLNSVFAGLGTGALYRAAAGPRSAVIAGAIGGLAAGAAVAGKQVMKRYVPI* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0654 182 PANTHER TIM23 24 170 IPR045238 GO:0022857
Vvi4g0654 182 Pfam Tim17/Tim22/Tim23/Pmp24 family 56 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0654 Vvi-Chr4 6751903 6752451 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0654 2 178 Chloroplast and Mitochondria Gene Families AT1G17530 60.894 1.57e-67 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0654 K17794 - vvi:100255976 331.643