Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0648 ATGGCTGGTTTCTTGAGAGCTCTGTGTTATTCTCAGGTTCTGGTGTTTTTACTCTCCATCACCTGCTCAGCAGCCAAAGAATTCTTGGTTGGAGGCAAGACCAATGCGTGGAAGATCCCATCTTCCCAATCCGATTCTCTCAACAAATGGGCTGAGAGCTCTCGCTTCCTGGTCGGCGACTCTCTCGTGTGGACATACGACAAAGAGAAAGATTCAGTGTTGAAGGTGAGGAGGGAAGCATACATAAGCTGCAACACATCAGACGCCATTGAAGAGTACAACGGCGGGAACACCAAGGTGACGCTGGATAAATCTGGGCCTCACTATTTCATCAGTGGGGCTGACGGGCACTGCGAGAAGGGGCAGAAGGTCATAGTGGTGGTGCTGTCTCAGAGGCACAGGTTGGTTGGCGTTTCTCCTGCCCCTTCTCCCTCCGAGGTAGAGGGTCCTGCCGTGGCTCCCACTAGCGATGCTTCCAGTTTCAAGGCTGGGTATTTGGTGGCTTTAGGGGTTTTGGTAGGGTTTATGTGGATGTAG 537 0.5214 MAGFLRALCYSQVLVFLLSITCSAAKEFLVGGKTNAWKIPSSQSDSLNKWAESSRFLVGDSLVWTYDKEKDSVLKVRREAYISCNTSDAIEEYNGGNTKVTLDKSGPHYFISGADGHCEKGQKVIVVVLSQRHRLVGVSPAPSPSEVEGPAVAPTSDASSFKAGYLVALGVLVGFMWM* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0648 178 CDD OsENODL1_like 26 129 IPR041846 -
Vvi4g0648 178 Pfam Plastocyanin-like domain 37 122 IPR003245 GO:0009055
Vvi4g0648 178 FunFam Early nodulin-like protein 1 25 133 - -
Vvi4g0648 178 Gene3D - 24 133 IPR008972 -
Vvi4g0648 178 PANTHER BLUE COPPER PROTEIN 25 140 IPR039391 GO:0009055
Vvi4g0648 178 SUPERFAMILY Cupredoxins 25 129 IPR008972 -
Vvi4g0648 178 ProSiteProfiles Phytocyanin domain profile. 26 130 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0648 Vvi-Chr4 6657162 6657798 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0648 8 177 Phytocyanin Superfamily AT4G31840 50.588 3.26e-54 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0648 - - vvi:100249108 359.762