Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi4g0641 | ATGGCCGACCACCGCTCTCAAACCCTAGCCCCAGTGCCTCACCCCTCCCACTATGATCACGATTGCCCTTCCTTCTCTGACCTCTTCAACGGCGTTACTCACTCTGAGTTCCCCACCATTCAAAATGTTGGGTTTCAGGGACAATTTGGGATGTCCCATCAAGAAGTTTTGGCAAGTGTGACAGCTAAAGCTGCTCAAGCTCCGGTTCAGATGGATCAACCTGTGTGTATGCATTCTTCTACTGAATCGTCATCTGTTCCAAAATCTGAGATATCCATGCCAAATTCAACACCAGGTGTAGAAAACCCATTAGCATTACCCCAAGATAATGCCTCCATCAAACAAAGAGCGGACCAGAAAGACTTTTCTGATCATAAAACCCAGCTTGCTGATACTGTTGTTATGAACATCCCCAATGATGGGTATAACTGGAGGAAGTATGGTCAGAAACAAGTGAAGAGCACTGAAAGTTCTAGAAGCTATTACAGATGCACATATTCTGATTGTGATGCGAAGAAGAAGGTTCAACAATGTCACCAGTCTGGTTTTGTAACTGGAGTTATTTATAAGGGTTTTCATAACCATGATCCACCTCCAAAGATTAGATGCACTCAGCTAAGGAAGTCTGCAGCTGTTAGTCCTGTTGAAGGGAGTGATACTGTATATCCTACAGCACAAAAGCTCGGAAATTCAGATCTATCCAATTATAAGAGTGAACCTGGAAAAGCATCAGTAGCAATGCCTGAATTGGAGCGACAGAACTCCAGCAATTCTGATAGCAATACAGGTATTAAAGCTGAGGAGGAAATTGGTGATGTGGTAGAGCGAAAACGAAGGATGAAACCCCAAGAACCACTGGTGCTTCCATCAAGACGGAAACAGAGAAGTTCATGTAGTTCAAATGAGATTGTCAAAAAAGAAGTTGGGGAATGTGGGGATGAACAAAAACCTAAACAAAGGATGAAAGAAGGAGGTTTAGCATGTTCAGCTCCCCTCTTTAAAACTATTAAGGAGCCTAAAATTGTTGTCCATGCTGCTGGTGATGTGGGGATCTCAAGTGATGGCTACAGGTGGCGCAAGTATGGCCAAAAAATGGTGAAAGGGAATCCTCATCCCAGGAGCTATTACAGGTGCACATCTGCTGGTTGCCCGGTCCGGAAGCATGTGGAGAGGGATACAGATGACAAAACAACCATCATAGTAACATATGAGGGGAAACATGACCATGACAGGCCGGTACCTAAGAAGCGGCATAGTCCACGAACTGCTGCTTTTCTTATTGCGGCTGCTGCTGCTATGAACAACAACCAATGCAAGAAAACAGAAACTTTGGCAAATCAAAGATCTTCAAACCAGCAGTCAGCTGACATGGAACATGATTTAACATGTCAGAAGGCTTTGGAACTTGGAGGTGAGAAGGCATTGGAGTCAGCTCGAACTCTTTTGAGTATTGGAATTGAAATCAAGCCTTGTTGA | 1476 | 0.4411 | MADHRSQTLAPVPHPSHYDHDCPSFSDLFNGVTHSEFPTIQNVGFQGQFGMSHQEVLASVTAKAAQAPVQMDQPVCMHSSTESSSVPKSEISMPNSTPGVENPLALPQDNASIKQRADQKDFSDHKTQLADTVVMNIPNDGYNWRKYGQKQVKSTESSRSYYRCTYSDCDAKKKVQQCHQSGFVTGVIYKGFHNHDPPPKIRCTQLRKSAAVSPVEGSDTVYPTAQKLGNSDLSNYKSEPGKASVAMPELERQNSSNSDSNTGIKAEEEIGDVVERKRRMKPQEPLVLPSRRKQRSSCSSNEIVKKEVGECGDEQKPKQRMKEGGLACSAPLFKTIKEPKIVVHAAGDVGISSDGYRWRKYGQKMVKGNPHPRSYYRCTSAGCPVRKHVERDTDDKTTIIVTYEGKHDHDRPVPKKRHSPRTAAFLIAAAAAMNNNQCKKTETLANQRSSNQQSADMEHDLTCQKALELGGEKALESARTLLSIGIEIKPC* | 492 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi4g0641 | 491 | MobiDBLite | consensus disorder prediction | 222 | 238 | - | - | |
Vvi4g0641 | 491 | Gene3D | WRKY domain | 124 | 199 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Vvi4g0641 | 491 | Gene3D | WRKY domain | 337 | 413 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Vvi4g0641 | 491 | MobiDBLite | consensus disorder prediction | 222 | 263 | - | - | |
Vvi4g0641 | 491 | SMART | WRKY_cls | 138 | 197 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vvi4g0641 | 491 | SMART | WRKY_cls | 352 | 411 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vvi4g0641 | 491 | MobiDBLite | consensus disorder prediction | 249 | 263 | - | - | |
Vvi4g0641 | 491 | Pfam | WRKY DNA -binding domain | 354 | 409 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vvi4g0641 | 491 | Pfam | WRKY DNA -binding domain | 139 | 195 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vvi4g0641 | 491 | FunFam | WRKY transcription factor | 338 | 413 | - | - | |
Vvi4g0641 | 491 | MobiDBLite | consensus disorder prediction | 76 | 106 | - | - | |
Vvi4g0641 | 491 | SUPERFAMILY | WRKY DNA-binding domain | 134 | 198 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Vvi4g0641 | 491 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 83 | 450 | IPR044810 | GO:0003700 | |
Vvi4g0641 | 491 | ProSiteProfiles | WRKY domain profile. | 133 | 198 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vvi4g0641 | 491 | SUPERFAMILY | WRKY DNA-binding domain | 348 | 412 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Vvi4g0641 | 491 | ProSiteProfiles | WRKY domain profile. | 347 | 412 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi4g0641 | Vvi-Chr4 | 6569931 | 6576264 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vvi4g0641 | 111 | 491 | WRKY Transcription Factor Family | AT4G30935 | 42.377 | 3.72e-85 | 268 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Vvi4g0641 | WRKY | 2.6e-21 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi4g0641 | - | - | vvi:100262898 | 985.326 |