Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0634 ATGGCGCTGTTTCGGAAGTTCTTCTATCGGAAGCCGCCAGACGGGCTCTTGGAGATCTCTGAGAGGGTTTATGTGTTTGATTGCTGCTTTACCACGGATGTTCTGGAAGATGAGGAATATAAAGTTTACATGGGAAGCATAGTGGGTCAACTTCGTGAGCACTTCCCTGATGCTTCATTCATGGTGTTCAACTTCCGAGAGGGAGACAGCCAAAGCCAGATTTCTAGTATTTTGTCTGAGTATGATATGACTGTGATGGATTATCCTCGACATTATGAGGGTTGCCCATTACTCACAATGGAGATGATCCATCACTTTTTAAGATCAAGCGAAAGCTGGCTCTCACTTGGGCAGCAGAATGTACTCTTGATGCATTGTGAGCGAAGTGGGTGGCCAATTTTGGCTTTCATGTTAGCTGCCCTCTTGATTTATAGGAAGCAGTACACCGGGGAACAGAAAACTTTGGACATGATTTACAAGCAAGCACCTCGTGAGCTCTTGCAGCTGATGTCTCCACTAAATCCATTGCCTTCCCAACTGAGGTACCTGCAGTATGTATCAAGAAGGAATGTAGGCTCAGAGTGGCCTCCACTGGATAGGGCACTTACGTTGGACTGTGTCATTCTCAGAATCATTCCTAATTTGGATGGAGAGGGGGGTTGCCGTCCAATATTTAGGATATATGGTCAGGATCCTTTTATGGTTGCTGATCGGACTCCCAAAGTCCTGTTCTCGACCCCGAAGAGGAGCAAAACTGTTCGGCATTACAAGCAGGAAGATTGCGAGCTAGTTAAAATTGACATCCATTGCCATATTCAAGGGGATGTTGTGCTTGAGTGTATTAGCTTGGAAGAAGATATGGAACGTGAAGAAATGATGTTTAGGGTCATGTTTAACACAGCTTTCATACGATCAAATATTCTGATGCTTAACCGTGATGAAATCGATATTTTATGGAATTCTAAGGATCAATTCCCCAAAGACTTCAGAGCAGAGGTTCTATTTTCGGAGATGGATTCGGGTAATTCCCTTATTACAATTGATTTGGAAGGTGTTGAGGAGAAAGACGGTCTTCCTATGGAAGCATTTGCAAAAGTTCAAGAGATCTTCAGCAATGTTGATTGGCTAGATCCAAAGACAGATGTGGCATTCAATGTGCTCCAGCAAATCACTGCATCAAATGTTCTCCAGGAATTGGAGACTGATTCTGCTCAGAGTGGAGAAACTGTTGGTTTGTTGCAGGAATTAAGTCCTGAAAAGGTTGAAGATAAACCAAAACCTAAGGCAGCAGAAAACAATATCAGCAGTACCACATCCATGGCTTTGGGGAAACAACATATGACATCAGCTAAACCATCTGTAGATGCAAATTTGATTAGAAGGAAGATTGATCCCCAAGAACTGCAGGTTGCACTTCAACGGCCTGCTCAATCTAAGATCATATCCCAGCGGATACCTCAGACTCCTATATCTAATCCAGTTTCAAACAGGAAATGTCAATCTTCCACCATGAACTCGGTGGTTCCTGTTGGTCCTCCTCCACCTCCTCCACCTCCTTCATGTTCTGGGTCTGCCTCAAGTCCCAACATTACATCTACAGCCCCACCATCTCCTCCTTCCCCTGGTTTTATGCCAAAGGATTCTAGGTCCAATAATTTTCCACATGCTCCACCACCTCCACCTGCTCCTTTTGGCAAAGGGTTATCAAAAGCTTCTGGTGCCCAAGTTGCTGGCAGCAATGGAAATATACCTCCATTTCCTGGTCCACCTTCTGCTCAGTTTGGTGGAAAGGGTCGAGGCCTATCACGAGCTGGTCCAAAAATTCAGGCTCAACCCAAAAAGGCTTCTTTGAAGCCATATCATTGGTTAAAGTTAACAAGGGCCATGCAAGGGAGCTTATGGGCAGAGACGCAACGACCTGAGGAAGCTTCCAAGGCTCCTGAGTTTGACATGTCAGAACTAGAAAGTCTTTTCTCAACAGCTGTTCCAAATTCGGAAAATGGGGGCGTGGGTGGAAAATCAAATCGTCGTGCCTCAGGACCTAAATCCGAGAAAGTCCAGCTGATTGACCTTAGGCGAGCATATAACTGTGAAATCATGCTTACAAAAGTTAAGATGCCATTGCCTGATTTGATGCAGGGAGAGAGTGCCGTGTCAGCCTGTGGAGGCGGTTCTACCCTCTGTCCCGCTGTGATCTATGAGGCAGGGGATGCAGTGGAGGGTAAAGTAGGGTCAGCTGATGGACGGGTTAGAGAGGGTGATGGGATTTTTTTGAATAAGTTGGAAAGCCCAGCTTTTGGGCCAAGTATCGGGCCAAAAGGGCCAGTTCATGGGGTGTCTCTGGGCCTGTTTCATTTAAGTGGGTCAAGGCTGGGGCCTTTTAAAGAAACCCAGGAGGTATTGGGCTGTGACTTAAGGCCCAATGTCTCTTTCGGGGAGAAGGGAGAGGGTTTTGGGCCTGTAGGGCCTGCTGCTGCGGAAGGAGGAGATTTAAATGGGGAAGGCATCTCGAGCCCTCGAGCTAGGGCACAGTCGCCAGAAGTGGAGAAAGGCTCAGGAGATGTTGATCTCCTTGTCCGTGGGGAAGCGCCTTCGGCCTCACGTCCTACGGCTAAGACGTCTAGCTCAGAGAGGCAAGCTTTTATAGTGGAGGACCCTATCGTCGACATTTTGAGAGCTGCGTCGCCGTCAGAAGCCTCTGCGGAGCCGAAAAATGGGTCGTTGACTGATGATGCGCTGCGTGATGAAGCCTCCAGGTATGTCGGTCTTCTTTCGCCTTCTGTGGGGGGTCGGGAAACTTCTCCTTCTTCTCTTTTTCCTGGGATCGATCGGGCGGGGACGAAGGAAGGGGTTTCGTCTGGCTTGATTTCTGAGATTGAGGGAGAGGAGCAGCTCCCTCTTAGCATTATTCTGGCAGATGGCAACAATGGGGAGATGGGTTCAGAGGGGGAGAGATCCTCGAGTGGTGTAGGAAGGGGGGATGAGTTTGAGATATTATTACAAGACTTGGAAGGAAGAGGATGTCGATGGGATGATAGTTGCTTGGCGAGATTTAGCAAGTTCTTGGGTTTTTCGACGGAAGGATTTGAAGAAGAAATTCTGAACTTGCTTCTAAGAAACAAGAGAAGAAGGGAGCAGAATGTTAAGAAAGATATTTCAGGGTCCACTAAGTTTGATCGTGAATTGAAGAAATTAGAGTGGTCCATCAATTACAAAGGGGCGAGGAAGGAGAAATCTCTGAGCTCAGTCCTTGCCTTGGATGATTCAGCATTAGATGTTGATCAAGTTGATAACCTCATAAAGTTCTGTCCAACAAAAGAAGAGATTGAACTACTCAAGGGTTACAATGGTGACAAGGGAAACTTGGGAAAATGTGAACAGTTTTTCTTAGAATTAATGAAAGTGCCACGGGTGGAGTCCAAGCTAAGAGTTTTCTCATTTAAGATACAATTTCGTATCCAGGTTTCTGACCTCAAAAATAATTTGAATGTCGTAAATTCAGCATCTGAAGAGATCAGGAATTCGGTCAAATTGAAAAGAATCATGCAAACTATCCTTTCACTGGGAAATGCTTTAAACCATGGAACAGCAAGAGGTTCTGCTATTGGATTTCGATTGGATAGTCTCCTTAAACTCACTGATACACGAGCCCGGAACAACAAGATGACTCTCATGAATTATCTTTGTAAGGTGCTTGCTGAAAAGCTACCAGAACTTCTAGATTTTCCGAAAGACCTTTTGCATTTGGAGGCCTCAACAAAGATACAATTGAAATATCTGGCAGAGGAAATGCAAGCTATTAGTAAAGGGCTTGAGAAAGTTGTCCAAGAACTGACTGCATCAGAAAATGATGGTCCTGTGTCTGAAAACTTTTGCAAGACTTTAAAGGAGTTTCTTGTTTTTGCTGAGGCTGAAGTGAGGTCTTTAGCTTCACTTTATTCTGGGGTGGGTAGAAATGCAGATGCATTGGCTCTTTATTTTGGAGAAGATCCAGCTCGTTGCCCATTTGAGCAAGTTGTTTCTACTCTTCTCAACTTTGTGAGAATGTTTACACGGGCACATGAGGAAAACTGCAAGCAGCTTGAATTTGAGAGGAAGAAAGCACAGAAAGAAGCAGAAAGCGAGAAGATTAAGATTAATCACAAACAGGAGTCTGAGCACTTGGTACGGACTTCCATCAAGACAACCAAACATTACAGGACAGATAATTACACAGTTTTAAGGGAGATGGCGGAGCTGGAAGTCAAGTCATGTTCCAAGATCCACTTTGTAAGATATGTAGGAAGATTTTGTTGTAAAAATATCACTAATAGCTTTGTTTTCCTTTTTTATATTTTAGTTTGTCTTGTTTCTTTGTTATATTATTCCTTTGTGTACATTTTTTTAAAGTTAAATAGGGATGTAAATGTTGATAAATGA 4419 0.4453 MALFRKFFYRKPPDGLLEISERVYVFDCCFTTDVLEDEEYKVYMGSIVGQLREHFPDASFMVFNFREGDSQSQISSILSEYDMTVMDYPRHYEGCPLLTMEMIHHFLRSSESWLSLGQQNVLLMHCERSGWPILAFMLAALLIYRKQYTGEQKTLDMIYKQAPRELLQLMSPLNPLPSQLRYLQYVSRRNVGSEWPPLDRALTLDCVILRIIPNLDGEGGCRPIFRIYGQDPFMVADRTPKVLFSTPKRSKTVRHYKQEDCELVKIDIHCHIQGDVVLECISLEEDMEREEMMFRVMFNTAFIRSNILMLNRDEIDILWNSKDQFPKDFRAEVLFSEMDSGNSLITIDLEGVEEKDGLPMEAFAKVQEIFSNVDWLDPKTDVAFNVLQQITASNVLQELETDSAQSGETVGLLQELSPEKVEDKPKPKAAENNISSTTSMALGKQHMTSAKPSVDANLIRRKIDPQELQVALQRPAQSKIISQRIPQTPISNPVSNRKCQSSTMNSVVPVGPPPPPPPPSCSGSASSPNITSTAPPSPPSPGFMPKDSRSNNFPHAPPPPPAPFGKGLSKASGAQVAGSNGNIPPFPGPPSAQFGGKGRGLSRAGPKIQAQPKKASLKPYHWLKLTRAMQGSLWAETQRPEEASKAPEFDMSELESLFSTAVPNSENGGVGGKSNRRASGPKSEKVQLIDLRRAYNCEIMLTKVKMPLPDLMQGESAVSACGGGSTLCPAVIYEAGDAVEGKVGSADGRVREGDGIFLNKLESPAFGPSIGPKGPVHGVSLGLFHLSGSRLGPFKETQEVLGCDLRPNVSFGEKGEGFGPVGPAAAEGGDLNGEGISSPRARAQSPEVEKGSGDVDLLVRGEAPSASRPTAKTSSSERQAFIVEDPIVDILRAASPSEASAEPKNGSLTDDALRDEASRYVGLLSPSVGGRETSPSSLFPGIDRAGTKEGVSSGLISEIEGEEQLPLSIILADGNNGEMGSEGERSSSGVGRGDEFEILLQDLEGRGCRWDDSCLARFSKFLGFSTEGFEEEILNLLLRNKRRREQNVKKDISGSTKFDRELKKLEWSINYKGARKEKSLSSVLALDDSALDVDQVDNLIKFCPTKEEIELLKGYNGDKGNLGKCEQFFLELMKVPRVESKLRVFSFKIQFRIQVSDLKNNLNVVNSASEEIRNSVKLKRIMQTILSLGNALNHGTARGSAIGFRLDSLLKLTDTRARNNKMTLMNYLCKVLAEKLPELLDFPKDLLHLEASTKIQLKYLAEEMQAISKGLEKVVQELTASENDGPVSENFCKTLKEFLVFAEAEVRSLASLYSGVGRNADALALYFGEDPARCPFEQVVSTLLNFVRMFTRAHEENCKQLEFERKKAQKEAESEKIKINHKQESEHLVRTSIKTTKHYRTDNYTVLREMAELEVKSCSKIHFVRYVGRFCCKNITNSFVFLFYILVCLVSLLYYSFVYIFLKLNRDVNVDK* 1473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0634 1472 Pfam C2 domain of PTEN tumour-suppressor protein 200 337 IPR014020 -
Vvi4g0634 1472 MobiDBLite consensus disorder prediction 474 615 - -
Vvi4g0634 1472 Coils Coil 1351 1385 - -
Vvi4g0634 1472 MobiDBLite consensus disorder prediction 404 433 - -
Vvi4g0634 1472 Gene3D Protein tyrosine phosphatase superfamily 14 191 IPR029021 -
Vvi4g0634 1472 ProSiteProfiles C2 tensin-type domain profile. 199 338 IPR014020 -
Vvi4g0634 1472 SMART PTEN_C2_2 197 337 IPR014020 -
Vvi4g0634 1472 MobiDBLite consensus disorder prediction 474 507 - -
Vvi4g0634 1472 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1082 1377 - -
Vvi4g0634 1472 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 187 IPR029021 -
Vvi4g0634 1472 Gene3D Formin, FH2 domain 1064 1385 IPR042201 -
Vvi4g0634 1472 MobiDBLite consensus disorder prediction 660 684 - -
Vvi4g0634 1472 Pfam Formin Homology 2 Domain 610 713 IPR015425 -
Vvi4g0634 1472 Pfam Formin Homology 2 Domain 1081 1350 IPR015425 -
Vvi4g0634 1472 Gene3D - 196 340 - -
Vvi4g0634 1472 MobiDBLite consensus disorder prediction 925 944 - -
Vvi4g0634 1472 ProSiteProfiles Formin homology-2 (FH2) domain profile. 981 1376 IPR015425 -
Vvi4g0634 1472 SMART it6_source 606 1429 IPR015425 -
Vvi4g0634 1472 MobiDBLite consensus disorder prediction 814 879 - -
Vvi4g0634 1472 MobiDBLite consensus disorder prediction 508 523 - -
Vvi4g0634 1472 PANTHER FORMIN-J 1 1386 - -
Vvi4g0634 1472 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 338 IPR035892 -
Vvi4g0634 1472 Gene3D Formin, FH2 domain 602 720 IPR042201 -
Vvi4g0634 1472 SUPERFAMILY Formin homology 2 domain (FH2 domain) 620 713 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0634 Vvi-Chr4 6448272 6495369 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0634 597 764 FH2 protein (formin) Gene Family AT2G25050 51.412 2.27e-38 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0634 - - vvi:100249142 986.097