Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0580 ATGGCCACCCAACATGAGAATTATTCACTAGTCTCTATAACAAAGAGAGTTTCCGTGTACCCCAAATCACTGCGTCCCCAACAGCTCCTCAGCCTGTCCAATTTGGATAGGCAGTGTCCAACACTCATGTACTTGGTTTTCTTTTACAACCCATCTCATGCTTTGAAAAATTTATCCATCAAGACGGTTTTCAGTAGCTTGAAGTCTAGCCTGGAAGAAACCTTGTCTGCCTGGTACCCAGCTGCCGGTAGGCTGACTTTGAACCCTAGTGATGGGAAGCTTGAACTCTGGTGCAACAACGGTGGTGCAATTCTAGTTGAGGCAGTGACCCAAGTTCAAATCTCTGAGCTTGGAGATCTCTCAGAGTACAACGAATTCTACGAGAAGCTCGTCTTCAAGCCATCTTTTAATGGGAATTTCTCCGATATGCCTCTCCTTGTTGCCCAGGTGACAAGGTTTGGATGTGGAGGCTACTCGGTGGGTGTGGGCACGAGCCACTCCTTATTTGATGGACCAGCTGTGTTTGATTTTCTTCGTGCATGGGCTTCTAATACAACTATGATAGGGAGTACAGGTCTTGATCATCAGCAGCATAAGCCCGTGCACGATCGAGGGACACTGTTGGCTTGTATGCGATCGCAACCAGCAAGTGCTAAATTGGGTAAAAACCCGAATTCAGTGTCAAGAGTTGCAGCAATAGATCATTTATATCTACTGATAAAACAAGCTGCTAGCGATTGGAATCATGTCTCAGATGGGAAGCTTGGTGGGCAGAAGCTTTCCCACATGGGTAGCTCAAATCAAGACAATTATGTGCTCAAGACCTTTCATCTGAATGTTTCAATGATAGAAAGCTTGAAGAGGAAGATCTTTGGTGAGAAGAGAGGAAGCCTTCCATGTTCATCCTTTGAGGTGGTTGCAGCTCACCTGTGGAAGGCAAGGACCAAAGCTTTAGGACTAAGGAAGGAAAGAATGGTGTGCCTGCAATTTGCTGTGGACACAAGGACCAAGATGGTGCCGCCACTGCCGCAAGGCTTCAGCGGGAATGCTTATGTACTTGCATCCATAGCTCTAACAGCAGGAGAATTGGAGGAAGAAAGCCATGGGAGCTTAATCGAGAGGATAAAGGAAGCCAAGAACTCGGTCACCACCGACTACATCTGTGCATACATGGAAGCACTGGAAGCACCTCAGACCAGTCTCCCTCCCCTTAAGGAGCTAACCCTGGTTTCAGACTGGACAAGGATGCCATTCCACAAGGTCAATTTCCTCCATGGAGAAGCTGCCTTTGTATCACCACTGGTTCCTCCTATCACCCAAGTGGCATACTTCATGCACAGCCCCACTGAAAGTAGAAGCATTGATGTGAGAATTGGTCTACTCCCACAAACCTTGACTGCCTTCTCACACCACTTCCTCACCAATATGCAATAA 1434 0.4714 MATQHENYSLVSITKRVSVYPKSLRPQQLLSLSNLDRQCPTLMYLVFFYNPSHALKNLSIKTVFSSLKSSLEETLSAWYPAAGRLTLNPSDGKLELWCNNGGAILVEAVTQVQISELGDLSEYNEFYEKLVFKPSFNGNFSDMPLLVAQVTRFGCGGYSVGVGTSHSLFDGPAVFDFLRAWASNTTMIGSTGLDHQQHKPVHDRGTLLACMRSQPASAKLGKNPNSVSRVAAIDHLYLLIKQAASDWNHVSDGKLGGQKLSHMGSSNQDNYVLKTFHLNVSMIESLKRKIFGEKRGSLPCSSFEVVAAHLWKARTKALGLRKERMVCLQFAVDTRTKMVPPLPQGFSGNAYVLASIALTAGELEEESHGSLIERIKEAKNSVTTDYICAYMEALEAPQTSLPPLKELTLVSDWTRMPFHKVNFLHGEAAFVSPLVPPITQVAYFMHSPTESRSIDVRIGLLPQTLTAFSHHFLTNMQ* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0580 477 Gene3D - 10 219 IPR023213 -
Vvi4g0580 477 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 19 449 - -
Vvi4g0580 477 Gene3D - 250 473 IPR023213 -
Vvi4g0580 477 Pfam Transferase family 11 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0580 Vvi-Chr4 5596166 5598770 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0580 11 468 Monolignol Biosynthesis Gene Families AT5G48930 26.596 9.31e-37 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0580 K15400 - vvi:100256029 954.896