Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0553 ATGTTTGCAGAAGAGGATGGACTCAGGGGAGACCCAAGACTCCAAGCCATTTCTGAAGCCCTTAGAATCGTTCCTCACTTCCCAAAACCAGGAATAATGTTTCAAGATATAACAACATTGTTGCTTGATCACAAGGCGTTCAAAGGCACTGTGGAAATCTTTGTTGATCGCTACAGAGACATGGACATCTCTGTTGTCGCTGGAGTTGAAGCTAGAGGATTCCTGTTTGGTCCATCAGTTGCCTTAGCCATTGGTGCAAAATTTGTGCCATTGCGTAAACCTAAAAAGTTGCCAGGTGAAGTAATTTCTGAAGATTATGAGCTAGAGTATGGAACTGACCGTCTAGAGATGCATGTGGGTGCTGTTCACCCTGGGGAGCGGGCATTGGTAATTGATGATTTCGTAGCAACAGGTGGGACCCTCTCTGCAGCAATAAGACTTTTAAAACGGGTGGGGGCTGAAGTGGTCGAATGTGCATGTGTTGTTGGGTTGCCTGAAGTTGAGGGTCAAAGCAGGCTAAATGGAACGCCTCTCTATATTCTTGTGGGGCCACAGCTACGAGAGCGTCCTTGTTAA 576 0.4653 MFAEEDGLRGDPRLQAISEALRIVPHFPKPGIMFQDITTLLLDHKAFKGTVEIFVDRYRDMDISVVAGVEARGFLFGPSVALAIGAKFVPLRKPKKLPGEVISEDYELEYGTDRLEMHVGAVHPGERALVIDDFVATGGTLSAAIRLLKRVGAEVVECACVVGLPEVEGQSRLNGTPLYILVGPQLRERPC* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0553 191 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 10 184 - -
Vvi4g0553 191 NCBIfam adenine phosphoribosyltransferase 18 182 IPR005764 GO:0003999|GO:0005737|GO:0006168
Vvi4g0553 191 Hamap Adenine phosphoribosyltransferase [apt]. 17 184 IPR005764 GO:0003999|GO:0005737|GO:0006168
Vvi4g0553 191 Gene3D - 6 183 IPR029057 -
Vvi4g0553 191 FunFam Adenine phosphoribosyltransferase 1 5 184 - -
Vvi4g0553 191 CDD PRTases_typeI 51 181 IPR000836 -
Vvi4g0553 191 SUPERFAMILY PRTase-like 21 176 IPR029057 -
Vvi4g0553 191 Pfam Phosphoribosyl transferase domain 58 165 IPR000836 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0553 Vvi-Chr4 5100024 5105222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0553 11 182 PRT Gene Family AT1G27450 70.930 4.96e-92 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0553 K00759 - vvi:100245563 373.244