Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0532 ATGTCCATGGTTGCAGAAGAGCCAGGCTTCATTCAAATCTTCTCTGATGGTTCAGTAAAACGCCCTGAACGTGAAACCTCCCCTGCCTCAGAAGATTCATCATCCACTGGATACAAGTCCAAGGATGTGATAATTGACTCAACAAAACCAATTTCTGGGAGGATTTTTGTCCCTGATACTCCGGCTTCCTCTAGCCTCCTGCCAGTTCTAGTTTACTTCCATGGCGGCGGTTTCTGCATCGGCACAGCCACATGGCTTGGCTACCACACTTTCCTTGGAGACTTTGCCGTGGCCGCCCAATCAATAGTCCTCTCTGTGGACTACCGCCTTGCGCCTGAACACAGGCTCCCTACAGCTTATGATGATTGTTATTGCTCACTAGAGTGGCTAAGTAAGCAGGTGAGCTCTGAACCATGGCTTCAGAGAGCTGACCTCTCTCGTGTGTTTCTGTCAGGGGACAGCGCCGGAGGGAACATTGCGCACAATATTGCTATCAGGGCCATTCAAAAGGGTTGTGATGAGGTAAAGATTAAAGGGGTGTTGCCCATACATCCATATTTTGGGAGTGAGGAGAGGATTGATAAGGAAAAGGCAAGTGAATCAGCCAAGGATGTGGGGTTGACTGACTTGTTGTGGAAACTAAGCTTGCCAGAAGGATCAAACCGTGATTATTTTGGGTGTAATTTTGAGAAGGCAGAGCTGTCCAGGGAAGAATGGGATCGGTTTCCGGCAGTGGTGGTCTATGTGGCCGGCTTGGATTTCTTCAAAGAAAGGGGAGTTATGTATGCAGGCTTTTTGGAGAAGAGAGGGGCGGAGGTGAAGCTGGTGGAAGCTGAAGGAGAGCAGCATGTGTATCATATGTTCCATCCAAAATCCGAGGCTACTCGCTTGCTGCAGAAGCAAATGAGTGAGTTCATACACAGCTTTTAG 930 0.4871 MSMVAEEPGFIQIFSDGSVKRPERETSPASEDSSSTGYKSKDVIIDSTKPISGRIFVPDTPASSSLLPVLVYFHGGGFCIGTATWLGYHTFLGDFAVAAQSIVLSVDYRLAPEHRLPTAYDDCYCSLEWLSKQVSSEPWLQRADLSRVFLSGDSAGGNIAHNIAIRAIQKGCDEVKIKGVLPIHPYFGSEERIDKEKASESAKDVGLTDLLWKLSLPEGSNRDYFGCNFEKAELSREEWDRFPAVVVYVAGLDFFKERGVMYAGFLEKRGAEVKLVEAEGEQHVYHMFHPKSEATRLLQKQMSEFIHSF* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0532 309 Pfam alpha/beta hydrolase fold 70 287 IPR013094 GO:0016787
Vvi4g0532 309 Gene3D alpha/beta hydrolase 11 308 IPR029058 -
Vvi4g0532 309 PANTHER ARYLACETAMIDE DEACETYLASE 10 290 - -
Vvi4g0532 309 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 148 160 IPR033140 -
Vvi4g0532 309 MobiDBLite consensus disorder prediction 15 38 - -
Vvi4g0532 309 SUPERFAMILY alpha/beta-Hydrolases 33 307 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0532 Vvi-Chr4 4844194 4845123 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0532 3 307 Carbohydrate Esterase AT5G16080 38.390 7.26e-70 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0532 - - vvi:100242373 628.632