Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0531 ATGTCCATAGTTGCAGAAGTGCCGAGTTTCCTTCAAGTCCTTTCCAATGGTTTAGTAAAACGCTTTGAACCTGAAATCTCCCCTGTCTCAAATGAGTCATCATCCCATGGATACAAGTCCAAGGATGTGATGATTGACTCGACCAAGTCAATCTCTGGCAGAATGTTTCTGCCTGATACTCCAGGCTCCTCTAGCCACCTTCCTGTTCTAGTTTACTTCCATGGTGGTGGCTTCTGCATTGGCTCAACCGCATGGCTTGGGTACCATACTTTCCTAGGGGACTTAGCAGTGGCCTCACAAACTATAGTTCTTTCTGTGGACTACCGCCTTGCGCCTGAAAACAGGCTCCCTATAGCTTATGATGATTGTTTTAGTTCACTTGAGTGGCTAAGTAACCAAGTCAGCTCTGAACCATGGCTTGAGAGAGCCGACCTCTGTCGTGTGTTTCTCTCAGGGGATAGTGCTGGAGGGAACATTGCTCACAATGTTGCTCTCAAAGTAATTCAGGAAAAAACTTATGATCATGTAAAGATTAGAGGATTGTTGCCCGTACATCCTTATTTTGGGAGTGAGGAGAGGACTGAGAAGGAGAGGGAAGGTGAAGCAGCTGGATATGTTGCGATGAACGATTTGTTATGGAAACTAAGCTTGCCCCAAGGATCAAACCGGGACTATTCTGGGTGTAACTTTGAAAGGGCTGCAATTTCCAGTGCTGAATGGGGTCGTTTTCCAGCAGTGGTAGTATATGTGGCTGGTTTGGATTTCTTGAAAGAAAGGGGAGTTATGTATGCAGGTTTTTTGGAGAAGAAAGGGGTGGAGGTGAAGCTGGTGGAAGCTGAAGATCAGTCACATGTGTATCATGTGTACCATCCTCAATCTGAGGCTACCCATCTTCTGCAAAAGCAAATGAGTGAGTTCATCCACAGCTTCTAG 933 0.4587 MSIVAEVPSFLQVLSNGLVKRFEPEISPVSNESSSHGYKSKDVMIDSTKSISGRMFLPDTPGSSSHLPVLVYFHGGGFCIGSTAWLGYHTFLGDLAVASQTIVLSVDYRLAPENRLPIAYDDCFSSLEWLSNQVSSEPWLERADLCRVFLSGDSAGGNIAHNVALKVIQEKTYDHVKIRGLLPVHPYFGSEERTEKEREGEAAGYVAMNDLLWKLSLPQGSNRDYSGCNFERAAISSAEWGRFPAVVVYVAGLDFLKERGVMYAGFLEKKGVEVKLVEAEDQSHVYHVYHPQSEATHLLQKQMSEFIHSF* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0531 310 SUPERFAMILY alpha/beta-Hydrolases 33 308 IPR029058 -
Vvi4g0531 310 PANTHER ARYLACETAMIDE DEACETYLASE 21 293 - -
Vvi4g0531 310 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 148 160 IPR033140 -
Vvi4g0531 310 Gene3D alpha/beta hydrolase 12 309 IPR029058 -
Vvi4g0531 310 Pfam alpha/beta hydrolase fold 70 287 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0531 Vvi-Chr4 4842066 4842998 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0531 3 308 Carbohydrate Esterase AT5G16080 34.891 3.74e-66 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0531 - - vvi:100247510 624.78