Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0527 ATGTCCGTAGTTGCAGAAATTCCAGGTTACCTCCAACTCCTTTCTGATGGCTCCGTTAAACGACTTCAACAGCAAACTTCCCCTGCCTCCAATGGTTCATCATCCAATGGATATAAGTCCAAGGATGTGATCATTAACTCAACAAAGCCTACATCTGCAAGGATCTTTCTGCCTGATATTCTGGGCTCCTCTAGCCTCCTTCCAGTTATAGTTTACTTCCATGGTGGAGGTTTCTGCGTAGGCTCAACCACATGGCTTGGGTACCATACTTTCCTTGGAGACCTTGCGGTGGCATCCCAATCAATAGTTCTTTCGGTGGACTACCGCCTTGCACCCGAAAACAGGCTCCCTATAGCTTATGATGATTGTTATAGTTCACTTGAGTGGCTAAGTCGCCAAGTGAGCTCTGAACCATGGCTTGAGAGAGCTGACCTCTCTCGAGTGTTTCTCTCAGGGGACAGTGCTGGAGGAAACATCGTTCACAATGTTGCTCTCAGAACAATTCAGGAACAATCTTGTGATCAAGTAAAGATTAAAGGGTTGTTGATAATACATCCCTTTTTTGGGAGCGAGGAGAGGACCGAGAAGGAGAGGGCCAGCGGAGGAGAAGCTGAGGTTTTGACATGGCTTGACTTGTTTTGGAAACTAAGCTTGCCAGAAGGGTCAAACTGCGACTATTCTGGGTGTAACTTTGCGATGGCAGAATTGTCCAGGGCTGAATGGTCTCGGTTTCCACCAGCTGTGGTTTATGTGGCTGGTTTGGATTTCTCAAAAGAAAGGCAAGTCACGTATGCGGCCTTTCTGGAGAAGAAGGGGGTGGAGGTGAAGCTGGTGGAATCTGAAGGAGAAATTCATGCGTATCATATGCTCCATCCTGAATCTGAGGCGACTCGTTTGCTTCAAAAGCAAATGAGTGAGTTCATTCATAGCTTTTAG 936 0.469 MSVVAEIPGYLQLLSDGSVKRLQQQTSPASNGSSSNGYKSKDVIINSTKPTSARIFLPDILGSSSLLPVIVYFHGGGFCVGSTTWLGYHTFLGDLAVASQSIVLSVDYRLAPENRLPIAYDDCYSSLEWLSRQVSSEPWLERADLSRVFLSGDSAGGNIVHNVALRTIQEQSCDQVKIKGLLIIHPFFGSEERTEKERASGGEAEVLTWLDLFWKLSLPEGSNCDYSGCNFAMAELSRAEWSRFPPAVVYVAGLDFSKERQVTYAAFLEKKGVEVKLVESEGEIHAYHMLHPESEATRLLQKQMSEFIHSF* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0527 311 SUPERFAMILY alpha/beta-Hydrolases 27 309 IPR029058 -
Vvi4g0527 311 Gene3D alpha/beta hydrolase 10 310 IPR029058 -
Vvi4g0527 311 PANTHER ARYLACETAMIDE DEACETYLASE 10 292 - -
Vvi4g0527 311 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 148 160 IPR033140 -
Vvi4g0527 311 Pfam alpha/beta hydrolase fold 70 289 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0527 Vvi-Chr4 4823523 4824458 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0527 3 309 Carbohydrate Esterase AT5G16080 37.461 8.46e-67 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0527 - - vvi:100268028 618.616