Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0526 ATGTCCTTAATTGCAGATTTTCCAGGTTACTTCCAAGTTTTTTCTGATGGTTCGGTAAAACGTTATGAACGTGAAACCGCCCCTGCCTCCATTGATTCATCATCCAATGGATATAAGTCCAAGGATGTAATCATTAGCTCAACCAAGCCAATATCTGCACGGATATTTCTGCCTGATACTCTGGACTCCTCCAGCCACCTTCCAGTTCTAGTTTACTTCCATGGTGGTGGTTTCTGTGCAGTCTCAACCACATGGCTTGGGCACCATACTTTCCTTGGAGACTTTGCGGTGGCATCCCAATCGATAGTTCTTTCTGTGGACTACCGCCTTGCACCTGAAAACAGGCTCCCTATAGCTTATGATGATTGTTATAGTTCACTTGAGTGGCTAAGTTGCCAAGCGAGCTCTGATCCATGGCTTGAGAGAGCTGACCTCTCTCGCGTGTTTCTCTCAGGGGACAGTTCTGGAGGAAACATTGTTCACAATGTTGCTCTCAGAACAATTCAGGAACAATCTTGTGATCAAGTCAAGATTAAAGGGTTGTTGCCAATACATCCTTTTTTTGGGAGCCAGGAGAGGACTGAGAAGGAGAGGGCCAGCGGAGAAGCTGAGAATGTGGCAAAGACTGACTTGCTGTGGAAACTAAGCTTACCAGAAGGGTCAAACCGTGACCATCCTTGGTGTAACTTTGAGAAGGCCGAATTGTCCAGGGCTGAATGGTCTAGGTATCCACCAGTTGTGGTTTATGTGGCTGGTTCAGATTTCTTAAAAGAAAGGGGAGTTATGTATGCAGCCTTTCTGGAGAAGAAGGGAGTGGAGGTGAAACTGGTGGAAGCTGAAGGAGAGGTTCATGTGTATCATGTGCTGCATCCCGAATCCAAGGCTACTCGTTTGCTTCAGAAGCAAATGAGTGAGTTCATTCATAACTTTTAG 933 0.4598 MSLIADFPGYFQVFSDGSVKRYERETAPASIDSSSNGYKSKDVIISSTKPISARIFLPDTLDSSSHLPVLVYFHGGGFCAVSTTWLGHHTFLGDFAVASQSIVLSVDYRLAPENRLPIAYDDCYSSLEWLSCQASSDPWLERADLSRVFLSGDSSGGNIVHNVALRTIQEQSCDQVKIKGLLPIHPFFGSQERTEKERASGEAENVAKTDLLWKLSLPEGSNRDHPWCNFEKAELSRAEWSRYPPVVVYVAGSDFLKERGVMYAAFLEKKGVEVKLVEAEGEVHVYHVLHPESKATRLLQKQMSEFIHNF* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0526 310 Gene3D alpha/beta hydrolase 11 308 IPR029058 -
Vvi4g0526 310 Pfam alpha/beta hydrolase fold 70 287 IPR013094 GO:0016787
Vvi4g0526 310 PANTHER ARYLACETAMIDE DEACETYLASE 7 291 - -
Vvi4g0526 310 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 148 160 IPR033140 -
Vvi4g0526 310 SUPERFAMILY alpha/beta-Hydrolases 38 309 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0526 Vvi-Chr4 4818334 4819266 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0526 3 310 Carbohydrate Esterase AT5G16080 35.625 7.94e-64 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0526 - - vvi:100245713 630.557