Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0502 ATGGATTCTCCTGAAACTGCTAAGACCACCACCTCCACAACCAAATCCTCTTCACAATCTCCCCCACTTCAAGTCACTACATTTCCTCCAATTCCCCCTCCTGAAACTGCTGCAACCACCGCCACTTCTTCATCAAAATCTCCTCCAGTTCAAGACTCCCCTTTCTCTACATACGTTAGCAACCTGTCTCCTATAAAACCTGTCAAGGCTGCACACGTTGCACAAGAATTCCCAGGACTTTGTTCTCCTCCTCTTGTGTTTACATCACCACGGATAAATCCGCATCACGAAACAAGTTTTCTAAAAAGGACGCAATGCCATCATGTACAGTTTTCAACAGACAATGGGAGAGGCAAGAAAGTGGCCGCTGTTTCAAATATTTCTGATAATGCAAATGCCCAATTGAACACTGGGTTGGTAGCTAAAGTTGAGAAGGAATGTGATATTAAGGACTCTGTGCAAGACCAACCCTGCAGCTCCTCTGGGTGTGTTGATGAATACTTGGCTGATACCATGGAGGCAGACTCTGCAATTTCTGCACATTCAGCTGGTTCTTGTTTGAATCAATCTAATGATGCACTTCAATCATTACAAAGTGGTTTTACAGACTCAAACAATACCACCGCAAGATTTTTTGACAAAAAAAATATCAGTGTAGATAAAAAGAGGGAACTGGATGCATCTCCAGCTTTGTTAGAGCAAGCTGAAGATGAACTTCAAGGAAAGTCAGCATTCAATGTTAAGCCAGTGCCAACTGATGGAAAGCAAAGAGGTGGTGAAAGGACATCTACAGAAGTCCTAAATGTAGAATCTAATTTGTCTGTGGACTATGCTTCTGAACAGTTATATGAAAGTTCAGTGGCTCAGACTGCAGGAGGCAATCAGGATGAACTGGATTGCACTCCCCATTTGATGCCCGAAGCATTGCAGATTGTACGGATGGATGAAAATTGTGCTCAGCAAGCAGGAGAAATCTCAAATGGGCCTGTTGAGAACACAGTGCTGCATGATCCTGAGGCCAGTCAGCAGACTCAGCACCAACGTGGCATGCTTAGACGGTGCCTTCAATTTGGAGAGGCTCAATTGAATATTATCACAAACAACCCTAGTTTTTCATATCCAACAAGTATTGCAGCCAATTCAAGATTACTTGCTACTCCTAGTGATTCAGAGCTTCCAGAATCCTCATGTGTGGATTTAACTACAACTTCCAGCAACAAGCAATTGGCTTACTCACAACCAGTAACTGCCATGCTTCCTCCTCAAAACAGTGGAAACTCGTCCCTAGCAGGTTCCAAGCCATCTGGTATTGGCCTGCACTTAAATAGCATTGTCAATGCTGTGCCCATGGGTTTCAGTTCTACTACAAGCCTGAAAGTAGAAGAGAAAGATTATTCGAGTGCATGGAGAATAAGTGACTCAATTCCGTCAAATGTAATAGAGAATTCAGCTGGTACTGAAGATAGGAGAAACGAAAATAAGGCTTCAATTGCAATGAGTTCTGCTACTTCTCAGTCTTCCCATGGTCTGGAACCATCAAAGGATCCTCTGCTGTTGAAGCCAATAGAGCTTCATGAGATTCCATGTGATAAGAGAAAGTTTAACTCAGAGCATATGGACAGTCTTGAGGAATTCAACCAACCAAGCCCAAAAAAGAGAAGGCAAGCTTAA 1671 0.4309 MDSPETAKTTTSTTKSSSQSPPLQVTTFPPIPPPETAATTATSSSKSPPVQDSPFSTYVSNLSPIKPVKAAHVAQEFPGLCSPPLVFTSPRINPHHETSFLKRTQCHHVQFSTDNGRGKKVAAVSNISDNANAQLNTGLVAKVEKECDIKDSVQDQPCSSSGCVDEYLADTMEADSAISAHSAGSCLNQSNDALQSLQSGFTDSNNTTARFFDKKNISVDKKRELDASPALLEQAEDELQGKSAFNVKPVPTDGKQRGGERTSTEVLNVESNLSVDYASEQLYESSVAQTAGGNQDELDCTPHLMPEALQIVRMDENCAQQAGEISNGPVENTVLHDPEASQQTQHQRGMLRRCLQFGEAQLNIITNNPSFSYPTSIAANSRLLATPSDSELPESSCVDLTTTSSNKQLAYSQPVTAMLPPQNSGNSSLAGSKPSGIGLHLNSIVNAVPMGFSSTTSLKVEEKDYSSAWRISDSIPSNVIENSAGTEDRRNENKASIAMSSATSQSSHGLEPSKDPLLLKPIELHEIPCDKRKFNSEHMDSLEEFNQPSPKKRRQA* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0502 556 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 36 555 IPR044522 GO:0003700
Vvi4g0502 556 MobiDBLite consensus disorder prediction 479 556 - -
Vvi4g0502 556 MobiDBLite consensus disorder prediction 518 556 - -
Vvi4g0502 556 MobiDBLite consensus disorder prediction 37 55 - -
Vvi4g0502 556 MobiDBLite consensus disorder prediction 1 55 - -
Vvi4g0502 556 MobiDBLite consensus disorder prediction 245 264 - -
Vvi4g0502 556 MobiDBLite consensus disorder prediction 1 24 - -
Vvi4g0502 556 MobiDBLite consensus disorder prediction 495 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0502 Vvi-Chr4 4599533 4611029 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0502 34 186 CPP Transcription Factor Family AT3G22780 34.194 1.05e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0502 K21776 - vvi:100261127 1034.25