Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0486 ATGGGAAACATTAGAGTTCCTTTTAAAGGGATCATTAACGATTATAAAGGAAGAGCACCATGCTATAAACAAGATTGGACTGGTGCGCATGGCTCCGGTGTTAGGATATTGGCTCCAACTTTCTATATATTCTTTGCTTCTGCCCTTCCCGTCATTGCCTTTGGGGAGCAATTGAGTAGGGAAACAGATGGGCACTTGAGCTCAGTTCAAACTCTAGCTTCTACTGCTATATGTGGAATCATCCACTCAATTTTCGGTGGGCAGCCTTTGTTGATTTTAGGAGTTGCAGAGCCCACAGTTATAATGTACACTTACTTGTACAATTTCGCCAAAGGAAAGTCAGACTTGGGGAAGGATCTATATCTAGCTTGGGCTGGGTGGGTTTGCGTCTGGACAGCTTTAATGCTATTTCTTCTTGCAATATTCAATGCTTGCACCATCATCTCTAGGTTTACAAGGGTTGCAGGGGAACTCTTTGGCATGTTGATTGCAGTTCTTTTTGTTCAAGAGGCTATTAAGGGAGTAGTGAGCGAATTTAATATTCCCAAAGATGAAGATCCTAAATCAGTTAAGTATGAATTCCAGTGGCTTTATACAAATGGACTGCTTGGGATCATTTTCTCTTTTGGTGTACTTTTTACTTCCCTAAAGAGCAGAAGAGCAAGGTCATGGCGATATAGCACTGGATGGGTCCGAGAGTTCATTGCAGATTATGGGGTTCCTCTTATGGTCCTGTTGTGGACAGCATTATCTTACAGTATACCTAAGAAAGTTCCTTCTGGAGTTCCCAGGAGGCTCTTTTGTCGTGCTCCCTGGGATTCTGATTCAAATTACCAATGGGCTGTAGTACAGGATATGGGAAAGGTCCCATTGGGGTACATCTTTGCTGCCTTGATACCAGCTGTGATGATAGCGGGCTTATACTTTTTCGACCACAGTGTAGCTTCACAGATGGCACAGCAGAAGGAGTTCAATCTCAAAAACCCTTCTGCTTACCATTATGACCTGTTCTTGCTCGGAGTTATGACTCTGCTTTGTGGGTTGCTTGGATTTCCTCCTTCAAATGGAGTCCTCCCACAATCCCCCATGCACACTAAGAGTCTTGCAGTCCTCAAGAAGCTGTTGATTCGAAAAAAGATGGTTAAAAGCGCCAAGGAATGTATAAAAGAGCAAGCAAGCAACTCAGAAATGTATGGAAGGATGCAAGCTGTGTTCATAGAAATGGACACAGCTCCTAATGATGTTTCAGTAGACAAAGAGTTGAAGGACTTGAAGGAGGCTGTAATGAATAGCGAAGATGGAGGAGACACAAAAGGCAAATTCGATCCTGAGAAGCACATCGATCCTTACTTGCCTGTTCGAGTTAATGAGCAAAGAGTGACCAACCTGTTGCAGTCCCTCCTTGTAGGCATATCTGTATGTGCTATCCCTGTCATCAAGGCTATACCTACCTCAGTTCTTTGGGGATACTTTGCCTACATGGCCGTTGATAGCCTCCCTGGGAATCAGTTCTGGGAAAGGATCTTGCTGCTCTTTATCACCCCTGGCCGCCGTTACAAAGTCCTGGAAGGGGTTCATGCTTCATTTGTGGAAACAGTACCATTCAAGTACATTGCGACATTCACGCTCTTCCAACTCGTATATCTTATGATTTGCTTTGGAATAACATGGATACCTATAGCTGGAATACTGTTCCCAGTGCCATTCTTTCTTCTCATAAGCATAAGACAGTACATTCTGCCCAAGCTGTTCCAAACTCAGCATCTTCGAGAACTGGATGCCGCTGAGTACGAGGAAATTGCTGGAGCCCCACAGCGCAGCCGCAGCATCTCAATCAGGGAGAGAGAAGAAGCTGTTCCTGGAAGTCAAGGGACTGACGAAGATTTTTTTGATGCGGAGATATTGGATGAAATGACTACCAATAGAGGGGAGTTGAAGCTTAGAACTGTAAGCTTCAATGAAGATAGATTCTTTCAGGTATGA 1983 0.4407 MGNIRVPFKGIINDYKGRAPCYKQDWTGAHGSGVRILAPTFYIFFASALPVIAFGEQLSRETDGHLSSVQTLASTAICGIIHSIFGGQPLLILGVAEPTVIMYTYLYNFAKGKSDLGKDLYLAWAGWVCVWTALMLFLLAIFNACTIISRFTRVAGELFGMLIAVLFVQEAIKGVVSEFNIPKDEDPKSVKYEFQWLYTNGLLGIIFSFGVLFTSLKSRRARSWRYSTGWVREFIADYGVPLMVLLWTALSYSIPKKVPSGVPRRLFCRAPWDSDSNYQWAVVQDMGKVPLGYIFAALIPAVMIAGLYFFDHSVASQMAQQKEFNLKNPSAYHYDLFLLGVMTLLCGLLGFPPSNGVLPQSPMHTKSLAVLKKLLIRKKMVKSAKECIKEQASNSEMYGRMQAVFIEMDTAPNDVSVDKELKDLKEAVMNSEDGGDTKGKFDPEKHIDPYLPVRVNEQRVTNLLQSLLVGISVCAIPVIKAIPTSVLWGYFAYMAVDSLPGNQFWERILLLFITPGRRYKVLEGVHASFVETVPFKYIATFTLFQLVYLMICFGITWIPIAGILFPVPFFLLISIRQYILPKLFQTQHLRELDAAEYEEIAGAPQRSRSISIREREEAVPGSQGTDEDFFDAEILDEMTTNRGELKLRTVSFNEDRFFQV* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0486 660 Gene3D Helical hairpin bin 18 60 - -
Vvi4g0486 660 Pfam HCO3- transporter family 7 180 IPR011531 GO:0006820|GO:0016020
Vvi4g0486 660 Pfam HCO3- transporter family 453 543 IPR011531 GO:0006820|GO:0016020
Vvi4g0486 660 Pfam HCO3- transporter family 200 373 IPR011531 GO:0006820|GO:0016020
Vvi4g0486 660 FunFam probable boron transporter 2 18 60 - -
Vvi4g0486 660 PANTHER ANION EXCHANGE PROTEIN 5 601 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0486 Vvi-Chr4 4471176 4474852 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0486 1 656 Antiporters AT4G32510 68.778 0.0 957
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0486 K24194 - vvi:100247413 1314.29