Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0483 ATGGCTGTGATGAGGATGGGTCACAGTAAGAGCATTGCCAATAATACGGGTACAGCCAGTGGCAGCGGAATGAACCCAATTTTTCACGATTTTCTGGGTATGAGCTGTGCTTCTGATTCGCCTGTTGTTTTTGCTCCCAAGACTGTGGGGCATGGGGGCGATGCCAGGCGCTCGGAAGCGTCGCCGTCGGCCTCTGCTTCCGCCGGAGCTTCTTCCGGCGGTGGCCGTGGACCCATCTCCACCACCTCTGATCTGGGTTCGGAAAGACAGGCTGGAGATCATTTTGATGGAGTTCCATTTTATGGGCCAAAGAGTGATATTTCTGGGCCTGAGATAAGCAACCGGCTTGCGGGTAGTAAGCGAAGTAATTCTGATTCTTTTATGGGGTCATCAAGAGATGGGGTCCCTCAAATCGGACCAGAATCTCTTGAGAGCTCACACTTGATGAAGATACTTCGGAATGGAACTGGAGGAGATCGACCTAGGAGGTCCAGTGATGAGGAGCTATTCTTGGGTCTGCAGTCACTGAGGCCAACTTCTGCCTCCCTCATATTACAGCCACCCACTGGTAGTAGAACTGATGTCAATCTTTCCAAATGGGATCGATCTGTTACCATGAATGTGAACCCCACAGTGCAGTACCCTCTGCGTGCAGGTCAATTTGCTCCTTTCTTGCATCAAGTACCTCCAAACAGATTTAAGGATGCTAATTCTGGCAATGCTGGTCCTTCAAATTTATCCCAACCAGCTGCTGATGAAGGTTCTAGAACTGGAATTAAAGGATCTGGAATCCTGAGTTCCATTACTGCCAATGCCAGTGGCAGTGTCTCTGAGAGAAACCCATCTGGGTTGCTGCCAAGTGGCAACAGACCAAAGTCTAGGACTCATATTTTGGAGCCAGAGTCTTCTACTGCTCCAAGTCGACTTGGATCGACATCTTCTAGTCGGCAGATGACTATATTTTATGGTGGTCAAGCTCATGTTTTTGATGATGTCCACCCAAACAAGGCAGATGTAATAATGGCCTTAGCCGGATCAAACGGAGGATCCTGGTCCACGACTTACTCTCCAAAATCTACTGTGAAACCAGTTGGTGAAAGCACACCCAATGGAGAGAATGAAACTGGTATGGCTGGCAACTCCATGTTCCCGAGGGAATTTCGAGGAAGGTTGTCTCTCACTGGCAATCCTAGCCAAGGGTATGGCTCTGGTGACCGAATCTTGACGCTGACAGGGGCCCCTCAAGGTGTCAATATACCTAAAGATACAAGAAATCCAGTGAAAGCAGCCGAACCCAGTACTGAAGAAAAAAGAAGAGAGGTATGA 1326 0.4894 MAVMRMGHSKSIANNTGTASGSGMNPIFHDFLGMSCASDSPVVFAPKTVGHGGDARRSEASPSASASAGASSGGGRGPISTTSDLGSERQAGDHFDGVPFYGPKSDISGPEISNRLAGSKRSNSDSFMGSSRDGVPQIGPESLESSHLMKILRNGTGGDRPRRSSDEELFLGLQSLRPTSASLILQPPTGSRTDVNLSKWDRSVTMNVNPTVQYPLRAGQFAPFLHQVPPNRFKDANSGNAGPSNLSQPAADEGSRTGIKGSGILSSITANASGSVSERNPSGLLPSGNRPKSRTHILEPESSTAPSRLGSTSSSRQMTIFYGGQAHVFDDVHPNKADVIMALAGSNGGSWSTTYSPKSTVKPVGESTPNGENETGMAGNSMFPREFRGRLSLTGNPSQGYGSGDRILTLTGAPQGVNIPKDTRNPVKAAEPSTEEKRREV* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0483 441 MobiDBLite consensus disorder prediction 1 20 - -
Vvi4g0483 441 Pfam tify domain 313 345 IPR010399 -
Vvi4g0483 441 MobiDBLite consensus disorder prediction 60 88 - -
Vvi4g0483 441 MobiDBLite consensus disorder prediction 48 145 - -
Vvi4g0483 441 SMART tify_2 311 346 IPR010399 -
Vvi4g0483 441 MobiDBLite consensus disorder prediction 229 312 - -
Vvi4g0483 441 MobiDBLite consensus disorder prediction 233 252 - -
Vvi4g0483 441 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 106 371 IPR040390 -
Vvi4g0483 441 ProSiteProfiles Tify domain profile. 311 346 IPR010399 -
Vvi4g0483 441 MobiDBLite consensus disorder prediction 260 289 - -
Vvi4g0483 441 MobiDBLite consensus disorder prediction 298 312 - -
Vvi4g0483 441 MobiDBLite consensus disorder prediction 349 441 - -
Vvi4g0483 441 MobiDBLite consensus disorder prediction 349 377 - -
Vvi4g0483 441 MobiDBLite consensus disorder prediction 115 131 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0483 27 344 Tify Gene Family AT4G32570 40.810 2.23e-53 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Vvi4g0483 tify 5.9e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0483 - - vvi:100262779 857.44