Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0447 ATGATTGTAAGTGAGTGGGGTCAACCATTCTCTGTATTCCATAAGCTATCTTTGTGTGTTCTCCTTGGGGTGAGCTGTGGTGCAAATATTGCAGACTATGTGGCTCAGAGGTCTGTAGAGGCAGACAAGCTTTTAGACCCTATTAAGGTGGTGGCCCAAATTCTGATGTACCATTTTTTCATTGGAAGTGTCCCCACAAAATCAGAGATTAATCTGGCTAACTCTTACTTCTATGACAAAGCTATGTGCTTGCTTGCATGGAAACTCTTCCTACCTGAGGAAGAAGTGAACCTAAACCACCCAACTGCCAACCCTCTGATTCCTGGGAGGGGACCACCCTTGAAGTGCATGCCTCCAACACTGACAGTTGTGGCAGAGCATGACTGGATGCGAGACCGAGCCATTGCTTATTCAGAGGAGCTCCGGAAAGTTAATGTGGATGTGGTCCTTTTTTATTACAAGGATGTTGTGCATGAGTTTGCTACCCTTGATGTGCTCCTCAAGATACCACAGGCCCAAGCCTGTGCTGAGGACATTGCCATATGGGTCAAGAAGTATATTTCACTCAGAGGCCATGAGTTTTCTTATTGA 591 0.4585 MIVSEWGQPFSVFHKLSLCVLLGVSCGANIADYVAQRSVEADKLLDPIKVVAQILMYHFFIGSVPTKSEINLANSYFYDKAMCLLAWKLFLPEEEVNLNHPTANPLIPGRGPPLKCMPPTLTVVAEHDWMRDRAIAYSEELRKVNVDVVLFYYKDVVHEFATLDVLLKIPQAQACAEDIAIWVKKYISLRGHEFSY* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0447 196 Gene3D alpha/beta hydrolase 14 191 IPR029058 -
Vvi4g0447 196 Pfam alpha/beta hydrolase fold 16 161 IPR013094 GO:0016787
Vvi4g0447 196 PANTHER ARYLACETAMIDE DEACETYLASE 15 159 - -
Vvi4g0447 196 SUPERFAMILY alpha/beta-Hydrolases 20 187 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0447 Vvi-Chr4 4031894 4032600 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0447 17 196 Carbohydrate Esterase AT3G27320 80.000 2.02e-106 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0447 - - vvi:100251099 338.576