Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0430 ATGAACCCTTTTTTCAGATTGGGGATTTTTCTATCCCTACTTCTGCTAATCCCAACCCCGGCTCAATCAGCGGTTTCAAGCATAGATCTAGGTTCAGAATGGGTCAAAGTCGCCGTAGTAAACCTAAAACCCGGGCAGAGCCCAATCTCAGTAGCGATCAACGAAATGTCTAAACGCAAATCCCCGGCATTGGTAGCATTTCAATCTGGAAACCGCCTAATCGGTGAAGAAGCGGCCGGGATAGTCGCCCGCTATCCCGACAAAGTTTTTTCCTTTATCCGGGATATGATTGGAAAACCCTACAACAAAATTCAAGATTTTCTCGCGAAAATGTACTTACCATATAGTATAGTGGAAGATTACAGAGGCACGGCCGCGATTAGAGTTGATGATGGTACTGTTTATTCTCTGGAGGAGCTGGAAGCTATGATTTTAAGTTACGCGATAAAATTAGCAGAGTTTCACTCTAAGGTTCCAGTTAAGGATGCGGTGATTGCGGTGCCTCCATATCTCGGGCAGGCAGAACGCAGGGGGTTGCTTACTGCTGCACAATTGGCGGGTGTTAATGTGCTTGCGCTGATCAATGAGCATTCGGGTGTGGCATTGCAATATGGGATCGATAAGGATTTCTCGAATGGATCAAGGCATGTTGTGTTTTATGATATGGGATCAAGTAGTACTTATGCTGCACTTGTGTATTTTTCTGCTTATAATGCCAAGGAGTATGGAAAGACAGTCTCGGTTAACCAATTTCAGGTTAAGGATGTTATCTGGGATCCAGAGCTTGGTGGCCAAAATATGGAAATTCGTTTGGTGGAGTATTTTGCAGATGAGTTCAACAAACAAGTTGGGAATGGAGTTGATGTGAGGAAGTTCCCCAAGGCAATGGCTAAATTGAAGAAACAGGTTAAGCGGACAAAAGAAATTCTAAGTGCGAATACAGTTGCTCCAATATCAGTAGAATCCCTTTATGATGATCGAGACTTCAGGAGTACCATAACTCGTGAGAAGTTTGAGGAGCTCTGTGAAGATTTGTGGGAGAGATCTCTTATTCCTGCGAAGGAAGTGCTTAAGAATTCAGGTTTGAAGGTTGATGAGATATATGCAGTGGAGCTGATAGGAGGTGCCACTCGAGTGCCAAAGTTGCAGGCAAAGCTCCAGGAATTTCTTGGAAGGAAGGATCTGGACAGACATCTGGATGCTGATGAAGCTATAGTTCTTGGTGCTGCACTACATGCTGCAAATTTAAGTGATGGAATCAAATTGAATCGCAAGCTAGGAATGGTTGATGGTTCTTTATATGGACTTGTGGTTGAGTTAGATGGCCCTGGTCTTTTGAAAGATGAGAGCACTAGACAGTTAATTGTCCCAAGAATGAAAAAACTCCCCAGCAAGATGTTCAGATCCATTATCCATGACAAAGATTTTGATGTTTCATTTTCATATGAGAATGAAGATCTTCTACCACCTGGTGTTTCCTCTCCTAGATTTGCTCAGTATGCCGTGTCTGGTTTGGCAGATGCTAGTGCAAAATATTCTTCTCGGAACCTGTCCTCTCCCATTAAGGCAAATCTGCATTTCTCTCTCAGTAGAAGTGGAATACTTTCTCTGGATCGAGCAGATGCTGTTATTGAAATAACAGAATGGGTTGAAGTTCCCAAAGTGAATGTGACTCTGGAGAATTCAACTACTGCATCCCCCAATATATCAGTTGAAGTGAGTCCTCATAACACTTCAGAAGACAGCAATGAAAACTTGCATGGTGATGGTGGGATTAATAACACCTCCAACTCCACTGAAAATCAAAGTGACAAGGATCTTGGCACAGAAAAAAAACTGAAAAAGCGAACATTTAGGGTTCCACTGAAGGTAGTTGAGAAGACAGTGGGACCTGGAATGCCCCTTTCAAAAGAGTCTATTGCTGAAGCTAAACGCAAGTTGGAAGCATTAGACAAAAAGGATGCAGAGCGGCGAAGAACTGCTGAGTTAAAAAATAATCTGGAAGGATACATCTATACCACTAAAGAAAAGCTTGAATCATCTGAGGAGTTAGAGAAGATATCAACCACCCAGGAACGCCAGTCCTTTATTGAAAAGCTTGATGAGGTGCAAGAATGGTTGTATACTGATGGTGAAGATGCTACGGCTGCTGAGTTTCAAGAACGTCTAGATTTGTTAAAATCTATTGGTGACCCGATATTTTTCAGATTGACTGAGCTTACTGCACGGCCAGCAGCAATGGAAGATGCTCGCAAATACCTTGGTCAGCTGAATCAGATTGTACAAGACTGGGAGACAAAGAAACCTTGGCTTCTGAAAGATAAAATAGATGAGGTCCTGAGTGATGGTGACAAGGTCAAAAATTGGTTGGAAGAGAAAGAGGCTGAGCAGAAAAAGAGTTCTGGATTCAGCACTCCTGCATTTACCTCAGATGAGGTGTATGAGAAGATTTTCAAATTTCAAGAGAAGGTTGCCAGCATCAACCGAATTCCTAAGCCAAAGCCAAAAATTGAGAAGCCTCCAAAGAAGGAAACTGAGAACAATGGGGCTAGCAGTGAGGAGAAGGCGAATGCTTCCAACTCAACATCAGAAAAGACTCCCTCCTCCCAAAACGATCAATCAGCTGCAGGGGATTCAGATGGCAAGCCCAACGAGGAAGCAGAAGGAGATGCCCATGATGAGTTATGA 2688 0.4312 MNPFFRLGIFLSLLLLIPTPAQSAVSSIDLGSEWVKVAVVNLKPGQSPISVAINEMSKRKSPALVAFQSGNRLIGEEAAGIVARYPDKVFSFIRDMIGKPYNKIQDFLAKMYLPYSIVEDYRGTAAIRVDDGTVYSLEELEAMILSYAIKLAEFHSKVPVKDAVIAVPPYLGQAERRGLLTAAQLAGVNVLALINEHSGVALQYGIDKDFSNGSRHVVFYDMGSSSTYAALVYFSAYNAKEYGKTVSVNQFQVKDVIWDPELGGQNMEIRLVEYFADEFNKQVGNGVDVRKFPKAMAKLKKQVKRTKEILSANTVAPISVESLYDDRDFRSTITREKFEELCEDLWERSLIPAKEVLKNSGLKVDEIYAVELIGGATRVPKLQAKLQEFLGRKDLDRHLDADEAIVLGAALHAANLSDGIKLNRKLGMVDGSLYGLVVELDGPGLLKDESTRQLIVPRMKKLPSKMFRSIIHDKDFDVSFSYENEDLLPPGVSSPRFAQYAVSGLADASAKYSSRNLSSPIKANLHFSLSRSGILSLDRADAVIEITEWVEVPKVNVTLENSTTASPNISVEVSPHNTSEDSNENLHGDGGINNTSNSTENQSDKDLGTEKKLKKRTFRVPLKVVEKTVGPGMPLSKESIAEAKRKLEALDKKDAERRRTAELKNNLEGYIYTTKEKLESSEELEKISTTQERQSFIEKLDEVQEWLYTDGEDATAAEFQERLDLLKSIGDPIFFRLTELTARPAAMEDARKYLGQLNQIVQDWETKKPWLLKDKIDEVLSDGDKVKNWLEEKEAEQKKSSGFSTPAFTSDEVYEKIFKFQEKVASINRIPKPKPKIEKPPKKETENNGASSEEKANASNSTSEKTPSSQNDQSAAGDSDGKPNEEAEGDAHDEL* 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0430 895 MobiDBLite consensus disorder prediction 851 878 - -
Vvi4g0430 895 Gene3D - 209 396 - -
Vvi4g0430 895 MobiDBLite consensus disorder prediction 832 850 - -
Vvi4g0430 895 Pfam Hsp70 protein 28 734 IPR013126 GO:0005524|GO:0140662
Vvi4g0430 895 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 662 745 IPR029048 -
Vvi4g0430 895 MobiDBLite consensus disorder prediction 566 603 - -
Vvi4g0430 895 FunFam Heat shock 70 kDa protein 4 635 747 - -
Vvi4g0430 895 ProSitePatterns Heat shock hsp70 proteins family signature 3. 370 384 IPR018181 -
Vvi4g0430 895 FunFam Heat shock 70 kDa protein 17 424 571 - -
Vvi4g0430 895 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 424 567 IPR029047 -
Vvi4g0430 895 FunFam Heat shock 70 kDa protein 4 263 348 - -
Vvi4g0430 895 MobiDBLite consensus disorder prediction 828 895 - -
Vvi4g0430 895 Gene3D - 91 143 - -
Vvi4g0430 895 MobiDBLite consensus disorder prediction 566 612 - -
Vvi4g0430 895 Gene3D - 635 748 IPR029048 -
Vvi4g0430 895 PRINTS 70kDa heat shock protein signature 163 183 - -
Vvi4g0430 895 PRINTS 70kDa heat shock protein signature 56 68 - -
Vvi4g0430 895 PRINTS 70kDa heat shock protein signature 24 37 - -
Vvi4g0430 895 PRINTS 70kDa heat shock protein signature 367 383 - -
Vvi4g0430 895 PRINTS 70kDa heat shock protein signature 399 419 - -
Vvi4g0430 895 PANTHER HSC70CB, ISOFORM G-RELATED 23 869 - -
Vvi4g0430 895 CDD HYOU1-like_NBD 27 414 - -
Vvi4g0430 895 Gene3D Actin; Chain A, domain 4 263 348 - -
Vvi4g0430 895 Gene3D - 28 414 - -
Vvi4g0430 895 SUPERFAMILY Actin-like ATPase domain 214 416 IPR043129 -
Vvi4g0430 895 SUPERFAMILY Actin-like ATPase domain 27 208 IPR043129 -
Vvi4g0430 895 MobiDBLite consensus disorder prediction 879 895 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0430 Vvi-Chr4 3801427 3812003 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0430 27 465 Calmodulin-binding Proteins AT3G12580 30.631 3.28e-60 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0430 K09486 - vvi:100254281 1679.07