Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0349 ATGAAAACGGAGCACCCAAAGCTCAAGACCACGCCTCGCCCACTCTTCTCCTGCGGCTTCTTTAGCCACTGCACCCAGTCCGTTATCAGCCCCACCACCCCCAACACTCCCTCTCTCCCACTCTCTTCTCTCCCCACTCCCCCTCCTCCTCCTCCACCCCCACCACCCTCCTCCCACCAGCAATCTCACCCTCACCCTCCCCCTCCCCCTCCCCATCACCCTCCTCCCCCACCTGACTCTGAATCCTCCTCTTCTTCCACCTCCCAAAGCTTCACCCAGTGGCGCTTCCCTCTCCCAAACTCCCTTATCCTTCACCACCACCAACCTCCATCACAATCTCATCCCTCACACACCCAAATCTCTCCCCAGACCGACCACCCGCCGCCGTCTCCGCCGCTCATTGCCGTTGCCAATCTCGAGGAGCTCTTTCACGTAGCGGAGCTCCAGCTCAGCACCGGCTCCGACGTGGAGAAACTCGCGGCTCTTCAGTTACTGGAACGATCACTTGTTCCGGCTGCCGGCGGTGGAGAAGAAGCGTGCCCCGCGGCAGTGATGCGAGGGGTGGTGGGGTGTTTGAAAGATAGGGCGGGGGCGAGACCGGCGACGAAAGTGCTGCTGGCTCTTTGTTTGGCGGAGGGGAACCGGCACGTGGCGGTGGAGGCAGGGGCGGTGGCTGAGGTCGTGGAGGCGATGTCGGAGATGGAGGGGGCGGTGGCAGAGAGGGCGTTAGCAGCGCTGGAGCTGATGTGCACGGTGGCGGAGGGGGCAGCGGAGCTACGGGCGCACGCGCTGTCAGTGCCCATGATGATATCAATGATGGAGAGCATGGCGGGTAGAGGAAAAGAGTGCGCAATTAGCATACTGGCAGTGATATACATCGGGGCGGGCGATCAGGCGCCGCCGTCGGAAGAAGTGGCGCGTGCAGTGGCGTTGGCGCTGCAAGGCGATTGCAGCGCGAGAGGGAAGAGGAAGGGGGCTCAACTTCTGAGGGCACTTCAGGAGAATGGACGACTGGAGTTAACCCAAGAGGGATGA 1035 0.6222 MKTEHPKLKTTPRPLFSCGFFSHCTQSVISPTTPNTPSLPLSSLPTPPPPPPPPPPSSHQQSHPHPPPPPPHHPPPPPDSESSSSSTSQSFTQWRFPLPNSLILHHHQPPSQSHPSHTQISPQTDHPPPSPPLIAVANLEELFHVAELQLSTGSDVEKLAALQLLERSLVPAAGGGEEACPAAVMRGVVGCLKDRAGARPATKVLLALCLAEGNRHVAVEAGAVAEVVEAMSEMEGAVAERALAALELMCTVAEGAAELRAHALSVPMMISMMESMAGRGKECAISILAVIYIGAGDQAPPSEEVARAVALALQGDCSARGKRKGAQLLRALQENGRLELTQEG* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0349 344 MobiDBLite consensus disorder prediction 105 121 - -
Vvi4g0349 344 MobiDBLite consensus disorder prediction 82 97 - -
Vvi4g0349 344 MobiDBLite consensus disorder prediction 26 133 - -
Vvi4g0349 344 MobiDBLite consensus disorder prediction 38 81 - -
Vvi4g0349 344 Gene3D - 159 343 IPR011989 -
Vvi4g0349 344 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 343 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0349 183 335 U-box Gene Family AT1G49780 30.864 8.21e-15 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0349 - - vvi:100252675 454.907