Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0281 ATGGAGCTCTCTTTACTCCACATACTTCCATGGGCCACCCTCTTCACCACTCTTTCTCTTTCATTCCTCATCTACAAGCTCATGATCATCTCCCATGGCACACCCAGAAACCTTCCGTCCGGCAATACCGGTCTGCCCTATATCGGAGAAAGCATCCAGTTCCTCTCCAATGGCAGAAAGGGTCATCCCGAGAAGTTCATTTCTGAGAGAATGTTGAAGTTCTCATCCAAAGTTTTCAAGACCTCACTCTTCGGAGAAACTGCTGCAGTCTTCTGTGGCTCGGCCGGGAACAAGTTCTTGTTCTCCAACGAGAACAAGCTTGTGACCGCATGGTGGCCGAGCTCCGTAAACAAAATCTTCCCTTCCTCTCTGCAAACCTCCTCGCAGGAAGAATCAAAGAAAATGAGAAAGCTGCTTCCGGGCTTTCTCAAACCCGAAGCCCTCCAAAGATATATCAGTATCATGGACGTGATAGCTCAGAGGCACTTTGAGTCCAGCTGGAACAACAAGGAAGAAGTCACAGTCTTCCCGCTAGCCAAGATGTTCACATTCTGGCTGGCTTGTCGTCTGTTTTTGAGCGTAGAAGACCCCGACCATGTCGAAAAGCTTGCAGAGCCCTTCAACGAACTGGCCGCCGGAATCATAGCCCTACCTATTGATTTGCCTGGGACGTCATTTAACAAGGGGATCAAAGCTTCAAACCTGGTCAGAAAGGAGCTTCATGCAATAATCAAGAAGAGGAAGATGAATCTTGCGGACAACAAGGCGTCGACGACGCAGGACATATTGTCACATATGCTTCTCACTTGTGATGAGAATGGAGAGTACATGAATGAAGAGGATATAGCTGATAAAATTCTTGGGTTGCTCGTCGGAGGTCATGACACAGCCAGTGCTACCATTACTTTTATTGTCAAGTTTCTTGCAGAGCTGCCTCATGTTTACGATGAAGTTTTCAAGGAACAAATGGAGATAGCAAAATCAAAGGCCCCAGGTGAGCTGTTGAATTGGGAGGACATTCCAAAGATGAGGTATTCATGGAATGTAGCATGTGAAGTGATGAGACTGGCACCACCCGTTCAAGGAGCTTTCCGAGAAGCCATGAATGACTTCATCTTCGAGGGTTTCTCCATTCCAAAGGGATGGAAGCTGTACTGGAGCACGCACTCGACCCACCGGAACCCGGAGTTCTTCCCCAAGCCGGAAAAATTCGACCCCTCGAGGTTTGACGGAAAGGGACCAGCCCCTTACACCTATGTGCCTTTCGGAGGAGGACCCAGGATGTGCCCTGGCAAAGAGTATGCTAGATTGGAAGTACTAGTGTTCATGCACAATTTAGTGAGAAGGTTCAAATGGGAGAAGCTGCTGCCAGATGAGAAGATTATAGTAGACCCCATGCCCATTCCTGCAAAAGGCCTTCCCATTCGCCTCCATCATCACCAACCCTAG 1449 0.4845 MELSLLHILPWATLFTTLSLSFLIYKLMIISHGTPRNLPSGNTGLPYIGESIQFLSNGRKGHPEKFISERMLKFSSKVFKTSLFGETAAVFCGSAGNKFLFSNENKLVTAWWPSSVNKIFPSSLQTSSQEESKKMRKLLPGFLKPEALQRYISIMDVIAQRHFESSWNNKEEVTVFPLAKMFTFWLACRLFLSVEDPDHVEKLAEPFNELAAGIIALPIDLPGTSFNKGIKASNLVRKELHAIIKKRKMNLADNKASTTQDILSHMLLTCDENGEYMNEEDIADKILGLLVGGHDTASATITFIVKFLAELPHVYDEVFKEQMEIAKSKAPGELLNWEDIPKMRYSWNVACEVMRLAPPVQGAFREAMNDFIFEGFSIPKGWKLYWSTHSTHRNPEFFPKPEKFDPSRFDGKGPAPYTYVPFGGGPRMCPGKEYARLEVLVFMHNLVRRFKWEKLLPDEKIIVDPMPIPAKGLPIRLHHHQP* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0281 482 PRINTS P450 superfamily signature 429 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g0281 482 PRINTS P450 superfamily signature 348 359 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g0281 482 PRINTS P450 superfamily signature 292 309 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g0281 482 PRINTS P450 superfamily signature 420 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g0281 482 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 422 431 IPR017972 GO:0005506|GO:0016705
Vvi4g0281 482 Gene3D Cytochrome P450 31 480 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g0281 482 PRINTS E-class P450 group I signature 281 298 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g0281 482 PRINTS E-class P450 group I signature 419 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g0281 482 PRINTS E-class P450 group I signature 301 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g0281 482 PRINTS E-class P450 group I signature 429 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g0281 482 PRINTS E-class P450 group I signature 387 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g0281 482 PANTHER CYTOCHROME P450 26 36 469 - -
Vvi4g0281 482 SUPERFAMILY Cytochrome P450 34 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g0281 482 CDD CYP90-like 70 479 - -
Vvi4g0281 482 FunFam Taxadiene 5-alpha hydroxylase 30 480 - -
Vvi4g0281 482 Pfam Cytochrome P450 39 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0281 Vvi-Chr4 2470501 2472554 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0281 30 384 Cytochrome P450 AT5G36110 62.011 2.34e-155 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0281 K20667 - vvi:100242305 967.992