Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0277 ATGTGGCTGGGTAGAGGAAATACAGAAAAGAAGGAAGGAGGAAATCCTTTGGTAGCAGTGGCAATAGACAAGGACAAAGGGAGCCAATCGGCTCTCAAATGGGCTATTGATAATATCCTCAACAGAGGCCAGACTGTTGTTCTCATCCATGTCAAACTCAAACAAAGTCATAGTCATTCTTATCCAAGTATCTCTTTCTCTCCTTCATTCATAAATTCATCTCTAACCGTGGCCAAACTTGATCACTATACCAAGGAGTTGTTCCTTCCATTTCGGTGTTTTTGCACCAGAAAAGATATACAATGCAAAGATGTGATACTAGAAGATACTGATGTAGTGAAAGCATTGATTGAATATGTTTCTCATTCAGCAATTGAGGTTTTGGTTGTTGGTGCCCCTGCAAAAGGTGGCTTTCTCAGATTCAAGGCAATTGACATCCCTGGAAGTATAACAAAAGGGGCACCAGATTTTTGTACTGTATATGTCATATCCAAAGGGAAGATTTCATCCACACGATCTGCCTCCCGTGCAGCCCCAGCCATATCCCCTCTGCGTAACCAAATTATGAACCAAGGGAGCATCAGACCGGATCCATCAGATTTGCCTATTCCCCATGCTCCTAGTTCAAGAGCAGTTGAAAAGCCACCTGTGGAACCACCACGCAGCTCACATGATGATTTCGAACACATCAAGTCACCATTCACTAGAGGAGCAAGAGGCCCAAATGGCAGATCATATGGGGAAATTTCATTACCGGATTCGGATATATCCTTTGTCAGCTCTGGTAGGCCAAGCACTGACCGCATGTTTCCTCCATTTTATGACAGCAACATTGACATAATCAGGAGCAACCCACGGCTCTCAAACAGTTCTGACATGGATAACCAAACCTTTGAGTCATCACAAATGGGAAGAAAATCAATGGAAATTGGTTCTCCACCTGAATTCTTAGCAATTTCCCAGGAAAATGATAGGACGTCATGGTCATCGCAGTCGGCGGAAGATGTGGAAGCTGAAATGAGGAGGCTAAAGCTGGAGCTCAAGCAGACAATGGATATGTACAGTACAGCCTGCAAAGAAGCACTCTCAGCGAAACAGAAGGCGAGGGAGCTTCAGCGCTGGAAACTAGAAGAAGAACAGAGGTTAGAAGAGGCGCGACTTGCTGAAGAAGCTGCATTGGCAATTGCAGAAAGGGAAAAAGCTAAGTCCAGGGCAGCCATTGAGCATGCTGAAGCAGCTCAGAGGATTGCAGAACTGGAAGCACAAAAGAGAATCAATGCAGAAATGAAAGCAATTAAAGAAGCAGAAGAGAAGAAAAAGGTCCTGGATTCCCTGGCACAAACCGATGTCAGGTACAGGAAGTATACAATTGAGGAGATCGAATCTGCAACAGAATTCTTCTCAGAATCTCGCAAGATTGGAGAAGGGGGTTATGGGCCAGTATACAAGTGTAATCTGGACCATACACAAGTTGCAATTAAGGTTCTTCGACCAGATGCCGCTCAAGGAAGGTCACAGTTCCAGCAGGAGGTTGAAGTTCTCAGCTGCATACGCCATCCTAACATGGTTCTCCTCCTGGGAGCCTGCCCAGAGTATGGATGCTTGGTCTATGAGTACATGGCTAATGGGAGCTTAGAAGACCGGCTTTTCAGGCGAGGAGACTCTCCACCTCTGTCTTGGCAGCTGAGGTTCCGAATTGCAGCTGAAATTGGCACTGGACTGTTGTTCCTCCACCAGACTAAACCAGAGCCACTAGTGCACCGTGACCTAAAACCAGCCAACATCCTGCTGGACCGCAACTACGTAAGCAAGATTAGTGACGTTGGGTTGGCCAGGCTGGTTCCCCCATCTGTAGCTGACAATGTGACCCAGTATCGGATGACATCAACAGCTGGGACTTTCTGCTATATAGATCCAGAGTATCAGCAAACAGGCATGCTGGGCATAAAATCTGATGTCTACTCCCTTGGCATCATGCTTCTACAGATAATAACAGCCAAGCCACCAATGGGGTTGACTCACCTTGTTGAAAGAGCTATTGAAAAAGATACATTTGAAGAGATGCTGGATCCAGTTGTGCCTGATTGGCCACTTGAAGAGGCATTGAGCTTCGCCAAGATAGCCCTCCAGTGTGCAGAACTAAGGCGGAAAGACAGACCTGATCTTGGCAAGGCTGTGTTACCAGAACTCAACAGATTGAGAGAGCTTTCAGAGGAACATTTGGACCCAACTATGATGGGTGGCAGTCAGTACCACTCTACCAACCACAGCCAAGTTTCCTTCCGTCGGGATGTCGCAAGTGATCCTCTGCATGGACAGCGTGGATACTCTGAAGCTAGCTCCAAGAGCCGATCAACCTCATATTTTTCTGGAAGGTCAGGAAACAGGTTGTGA 2394 0.4645 MWLGRGNTEKKEGGNPLVAVAIDKDKGSQSALKWAIDNILNRGQTVVLIHVKLKQSHSHSYPSISFSPSFINSSLTVAKLDHYTKELFLPFRCFCTRKDIQCKDVILEDTDVVKALIEYVSHSAIEVLVVGAPAKGGFLRFKAIDIPGSITKGAPDFCTVYVISKGKISSTRSASRAAPAISPLRNQIMNQGSIRPDPSDLPIPHAPSSRAVEKPPVEPPRSSHDDFEHIKSPFTRGARGPNGRSYGEISLPDSDISFVSSGRPSTDRMFPPFYDSNIDIIRSNPRLSNSSDMDNQTFESSQMGRKSMEIGSPPEFLAISQENDRTSWSSQSAEDVEAEMRRLKLELKQTMDMYSTACKEALSAKQKARELQRWKLEEEQRLEEARLAEEAALAIAEREKAKSRAAIEHAEAAQRIAELEAQKRINAEMKAIKEAEEKKKVLDSLAQTDVRYRKYTIEEIESATEFFSESRKIGEGGYGPVYKCNLDHTQVAIKVLRPDAAQGRSQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLEDRLFRRGDSPPLSWQLRFRIAAEIGTGLLFLHQTKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADNVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDVYSLGIMLLQIITAKPPMGLTHLVERAIEKDTFEEMLDPVVPDWPLEEALSFAKIALQCAELRRKDRPDLGKAVLPELNRLRELSEEHLDPTMMGGSQYHSTNHSQVSFRRDVASDPLHGQRGYSEASSKSRSTSYFSGRSGNRL* 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0277 797 Gene3D Transferase(Phosphotransferase) domain 1 540 749 - -
Vvi4g0277 797 Pfam Universal stress protein family 18 141 IPR006016 -
Vvi4g0277 797 Gene3D HUPs 17 162 IPR014729 -
Vvi4g0277 797 PANTHER OS02G0152300 PROTEIN 18 771 - -
Vvi4g0277 797 Coils Coil 333 353 - -
Vvi4g0277 797 CDD STKc_IRAK 473 733 - -
Vvi4g0277 797 MobiDBLite consensus disorder prediction 217 233 - -
Vvi4g0277 797 MobiDBLite consensus disorder prediction 774 797 - -
Vvi4g0277 797 Gene3D Phosphorylase Kinase; domain 1 445 539 - -
Vvi4g0277 797 MobiDBLite consensus disorder prediction 174 244 - -
Vvi4g0277 797 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 18 141 - -
Vvi4g0277 797 Coils Coil 379 445 - -
Vvi4g0277 797 SMART serkin_6 467 727 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi4g0277 797 FunFam U-box domain-containing protein 51 540 740 - -
Vvi4g0277 797 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 439 539 - -
Vvi4g0277 797 CDD STK_N 17 166 - -
Vvi4g0277 797 ProSiteProfiles Protein kinase domain profile. 467 730 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi4g0277 797 Pfam Protein kinase domain 468 720 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi4g0277 797 MobiDBLite consensus disorder prediction 768 797 - -
Vvi4g0277 797 ProSitePatterns Serine/Threonine protein kinases active-site signature. 585 597 IPR008271 GO:0004672|GO:0006468
Vvi4g0277 797 SUPERFAMILY Protein kinase-like (PK-like) 450 725 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0277 Vvi-Chr4 2400523 2404519 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0277 1 761 Receptor kinase-like Gene Family AT1G78940 59.665 0.0 843
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Vvi4g0277 Pkinase 1.9e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0277 - - vvi:100250706 1452.96