Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0266 ATGGATTCCAAGAAGTCTAACAAGATCACTGAGATTGTCAGGCTTCAACAGATCCTCAAAAAATGGAGAAAACTTGCAAATACATCAAAGAGCAGTGGCAATAGCAGCAGCATAAAGAACAGCAACAATAACAACAGCAATAAGGGCAAACTTCTAAGGAGAACACTCTCCCTGTCGGAGAAATCAGATGTTGTCCCTAAAGGGTACCTGGCAGTTTGTGTTGGAGAAGAGCTTAAGAGATTTGTGATCCCAACCAAGTATTTGAGCCATCAAGCATTCATCATCCTACTCAGAGAAGCAGAAGAGGAATTTGGGTTTCAACAAGCAGGAGTTTTGCAGATTCCTTGTGAAGTTTCTGCATTTGAGAACATCTTGAAGGTGGTTGAGAAGAAGGATTTCAGGTTTCTCGGAGAAGATGCTATAGGATGCTGCTCATCAGAAAGCCAGCTAAACCAATCTTACCATCCACAAAGTCCTATGTGCACATGA 489 0.4192 MDSKKSNKITEIVRLQQILKKWRKLANTSKSSGNSSSIKNSNNNNSNKGKLLRRTLSLSEKSDVVPKGYLAVCVGEELKRFVIPTKYLSHQAFIILLREAEEEFGFQQAGVLQIPCEVSAFENILKVVEKKDFRFLGEDAIGCCSSESQLNQSYHPQSPMCT* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0266 162 MobiDBLite consensus disorder prediction 27 50 - -
Vvi4g0266 162 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 41 124 IPR003676 GO:0009733
Vvi4g0266 162 Pfam Auxin responsive protein 21 127 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0266 Vvi-Chr4 2329254 2329742 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0266 1 136 Calmodulin-binding Proteins AT2G24400 63.235 3.61e-54 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0266 K14488 - mesc:110612337 194.897