Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0237 ATGGTTTACAAGGGGCAGTTCCCCAATGGGGTCAAGATTGCAGTGAAGGTCCTGAATAGGAATTCGGACAGACAAACTGAAGAACAGTTCATGGCAGAGGTGGGAACCATAGGCAGAACTTACCATATCAATCTAGTCAGGCTCTATGGTTTCTGCTATGATCAGTTCATGAGCGCACTTGTCTACAAATACCTGGAAAACGAATCCCTAGACAAGTACTTATTCAGCGAGGCAAGAGAAATCGAGTGGGAGAAGCTGCATCATATAACAGTTAGGACAACAAAGGGCATAGCTTACTTATATGAAGAATGTGTACAAAGAATCACTCACTATGACATAAAACCCGGTTGGGAATTCGGCTTAATTCCCTTCAACTGGTATCAGAGCCTAGGATTAGGTTTGAGTGGGAGCAATGGCAGAGGAAGCAGGAAAGACATCTAG 441 0.4399 MVYKGQFPNGVKIAVKVLNRNSDRQTEEQFMAEVGTIGRTYHINLVRLYGFCYDQFMSALVYKYLENESLDKYLFSEAREIEWEKLHHITVRTTKGIAYLYEECVQRITHYDIKPGWEFGLIPFNWYQSLGLGLSGSNGRGSRKDI* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0237 146 SUPERFAMILY Protein kinase-like (PK-like) 2 115 IPR011009 -
Vvi4g0237 146 Pfam Protein tyrosine and serine/threonine kinase 6 103 IPR001245 GO:0004672|GO:0006468
Vvi4g0237 146 ProSiteProfiles Protein kinase domain profile. 1 146 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi4g0237 146 PANTHER OS07G0415500 PROTEIN 2 115 - -
Vvi4g0237 146 Gene3D Transferase(Phosphotransferase) domain 1 65 117 - -
Vvi4g0237 146 Gene3D Phosphorylase Kinase; domain 1 1 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0237 Vvi-Chr4 2082926 2084438 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0237 2 115 Receptor kinase-like Gene Family AT5G38280 41.379 7.96e-27 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Vvi4g0237 PK_Tyr_Ser-Thr 1.5e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0237 - - vvi:100266306 218.009