Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0219 ATGGCGGTGGTGAGTGATAGCATGATCGAGAAACTTGCGTCTGCGAGAAGGTCATTGAAGTCAAGCTTGGAGAAATCAAGGGTGCTAGGGTTAGCTCTAGAGAAAAGCGGGCCTAGATTGGAAGAGATTAATCAAAGATTGCCTTCGCTCGAGGCTGCGGTTCGACCTATTCGAGCCCAGAAGGAAGCCCTTGTCGCAGTTGGCGGTCACATCAATCGAGCTGTCAGCCCTGCTGCGGCGGTTCTGAATGTGTTTGATGCTGTTCACGGGCTCGAAAAATCGCTATTGTCCGATCCCCGCAACGATCTTCCGGGTTATCTCTCAGTGTTGAAAAGGCTTGAGGAGGCATTGAAGTTTCTAGGTGATAATTGTGGGTTAGCGATTCAGTGGTTGGAGGATATAGTGGAGTACTTGGAGGATAATTTGGTTGCCGATGAACGGTATCTTTCGAATTTGAAGAAGTCCCTGAAGAATCTCAGGGAATTGCAGAATGATGAAGAGCGAGTTTGCCTCGATGGCGGGTTATTGGAAGCTGCATTGGATAAATTGGAATGTGAATTCCGGCTTCTCTTGACAGAAAACAGTGTCCCATTACCCATGTCTTCTCCATCGTCTCTGGGAGAACAACCCTGCATTGCCCCATCCCCTTTGCCAGTAATGGTTATACAGAAATTGCAAGCAATCATTGGGAGATTAACTGCAAATAAGAGACTTGAGAAGTGCATTTCTATATATGTTGAGGTTAGGAGTTCCAATGTTAGAGCTAGTTTGCAGGCTCTTGATTTGGATTACTTGGAGATTTCGATCTCCGAATTCAATGATGTGCAGAGCATAGAGGGGTACATAGCTCAGTGGGGCAAGCATTTGGAGTTTGCAGTGAAACATTTGTTTGAGGCAGAGTACAAGCTCTGTAATGATGTCTTTGAGCGGATTGGATTGGATGTTTGGATGGGCTGCTTTGCGAAGATAGCTGCACAAGCGGGAATTCTTGCATTTCTTCAGTTTGGGAAGACGGTTACAGAGAGTAAGAAGGACCCTATCAAGCTGTTGAAGCTATTGGATATCTTTGCATCCTTGAACAAGTTGAGATTGGATTTCAACCGCCTTTTTGGTGGAGGGGCATGTATTGAGATCCAAAACCTGACTAGGGATCTCATCAAAAGCATCATTGAGGGGGCGTCTGAGATTTTCTGGGAACTTTTGTTTCAAGTGGAATTACAGAGGCAAACAGCACCCCCTTCAGATGGGAGTGTTCCAAGACTGGTGAGTTTTCTTACTGATTACTGTAATAGGCTACTTGGGGACAATTATAAGCCGATCTTGACACAAGTTCTTGTTATTCACCGAAACTGGAAGCATGAGAAATTCCAAGAAAGACTACTTGTTGATGCCATTTTAAACATCATTAAAGCTATTGAGAAAAACTTAGAAACATGGTCAAAGGGTTATGAGGATGCTACCCTTGCCAATCTTTTTCTGATGAACAATCACTGGCATTTGCATAAACACTTGAAGGGAACAAAGCTTGGAGATCTTCTGGGGGATTCTTGGTTAAAAGAACATGATCAGTCCAAGGACTACTATGCTGCAATATTCCTGAAAGATAGCTGGGGGAAGCTTCCATCCCTCCTAAGTAGGGAAGGTCTGATGCTGTTCTCAGGTGGGCGTGCTACTGCTCGTGATCTTGTCAAGAAAAGGTTGAAATCTTTCAACGAAGCTTTTGATGACATGTATAAGAAACAGTCCAATTGGGTCGTGTCTGAAAGAGATTTGAGGGACAAAACTTGTCAGCTTATAGTGCAGGCAGTTGTTCCAGTCTACCGGAGCTACATGCAAAACTATGGGCCCTTGGTTGAGCAAGACCCAAGTGCTAGTAAGTATGCAAAGTACACTGTACAGACATTGGAGAATATGCTTGCCTCTCTCTTTCAGCCTAAGCCAGCAAAATATGAGGAGGAGGAGGAGCAGAGCCGCAGCGCAGCCGCAGCAGCCATGGAGGTTATGGTGGAGGTGTCTTCGATCCCGGCGTACGTTGGCGGGATGACGCAGGATAAGCAGAGGGAGGAGGAGGTTGGAGGCGGCGTGGTGGTGGGTCGCTTTTCCGGCCAGAGGGACAAAGGGGGGTTTCTGAGTGGATCGGGGAAGAGGGGCGTCGGATCGGAGAAGCCGGAGGAGTCGTCGGAGGCTTCTTCGCTCGGTAATCTCAGCGATGACGAGGACGACGAGGGGGACGACGTCGTTTCATCAAGCGGTGGTGGAGGTAACGACGTCGTATCGGCTAACGCAGGCTTCGCTTCTCTGGGTTCCCTGGAGGACTCTCTTCCCATCAAGAGGGGGTTGTCGAATTGTTTCTCGGGAAGATCAAAGTCGTTTGCGAATCTATCAGACGTGAACACGGTGGCGGATTTGCAGAAGGAAGAGAATCCATTCAACAAGAGGAGAAGAACCCTGATTGCATACAAGCTGTCGAGAAAAAATTCAGGTTTCTACAGTTGGCAAAACCCAAATTCAATGCCTCTTTTGACCCTCAAAGAAGACCCAAATCAAGAGAACAACTCATCAGAAGACGAAGAAGAAGACAGAGAACAAAAACTCCATCAGAGGAAGTTCAAGACCTTCAAATCAACAAGCTGTTTTTCTCTTGCAGATCTGTAA 2655 0.467 MAVVSDSMIEKLASARRSLKSSLEKSRVLGLALEKSGPRLEEINQRLPSLEAAVRPIRAQKEALVAVGGHINRAVSPAAAVLNVFDAVHGLEKSLLSDPRNDLPGYLSVLKRLEEALKFLGDNCGLAIQWLEDIVEYLEDNLVADERYLSNLKKSLKNLRELQNDEERVCLDGGLLEAALDKLECEFRLLLTENSVPLPMSSPSSLGEQPCIAPSPLPVMVIQKLQAIIGRLTANKRLEKCISIYVEVRSSNVRASLQALDLDYLEISISEFNDVQSIEGYIAQWGKHLEFAVKHLFEAEYKLCNDVFERIGLDVWMGCFAKIAAQAGILAFLQFGKTVTESKKDPIKLLKLLDIFASLNKLRLDFNRLFGGGACIEIQNLTRDLIKSIIEGASEIFWELLFQVELQRQTAPPSDGSVPRLVSFLTDYCNRLLGDNYKPILTQVLVIHRNWKHEKFQERLLVDAILNIIKAIEKNLETWSKGYEDATLANLFLMNNHWHLHKHLKGTKLGDLLGDSWLKEHDQSKDYYAAIFLKDSWGKLPSLLSREGLMLFSGGRATARDLVKKRLKSFNEAFDDMYKKQSNWVVSERDLRDKTCQLIVQAVVPVYRSYMQNYGPLVEQDPSASKYAKYTVQTLENMLASLFQPKPAKYEEEEEQSRSAAAAAMEVMVEVSSIPAYVGGMTQDKQREEEVGGGVVVGRFSGQRDKGGFLSGSGKRGVGSEKPEESSEASSLGNLSDDEDDEGDDVVSSSGGGGNDVVSANAGFASLGSLEDSLPIKRGLSNCFSGRSKSFANLSDVNTVADLQKEENPFNKRRRTLIAYKLSRKNSGFYSWQNPNSMPLLTLKEDPNQENNSSEDEEEDREQKLHQRKFKTFKSTSCFSLADL* 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0219 884 SUPERFAMILY Cullin repeat-like 81 643 IPR016159 -
Vvi4g0219 884 Coils Coil 149 169 - -
Vvi4g0219 884 PANTHER EXOCYST COMPLEX PROTEIN EXO70 75 643 IPR004140 GO:0000145|GO:0006887
Vvi4g0219 884 MobiDBLite consensus disorder prediction 833 848 - -
Vvi4g0219 884 Gene3D Exocyst complex component Exo70 138 652 - -
Vvi4g0219 884 FunFam Exocyst subunit Exo70 family protein 131 649 - -
Vvi4g0219 884 MobiDBLite consensus disorder prediction 833 868 - -
Vvi4g0219 884 MobiDBLite consensus disorder prediction 698 755 - -
Vvi4g0219 884 Pfam Exo70 exocyst complex subunit 284 640 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0219 Vvi-Chr4 1913863 1923695 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0219 6 650 EXO70 exocyst subunit family AT4G31540 76.110 0.0 1031
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0219 K07195 - vvi:100254158 1218.37