Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0196 ATGGCTGCTACGGTGGAAGCGAAGGCGGTGTCTGGGATCGAGATTGAGATGCAATCAACTTCGAGCGCTAAGCATCGGGAAGTGGAATTTGCGAAATGCGATTGCTGTGGATTGACTGAGGAGTGCACGATTGAGTACATAGAACGCGTTCGCGAGAGGTACCAAGGGCGTTGGATTTGTGGACTTTGCGCGGAGGCGATCAAAGATGAGATTGTGAGATCGAAGAGGCTGATCAGCGCCGAAGAAGCGCTCAATCGGCACATGAACTTCTTCAAACGGTTTAGATCTTCAAATCCGCCTAATCATACTGAGAGCTTGATCTCTGCTGTGAAACAGCTGCTCTTGCGAACTCTGGACTCCCCGAGATCGCTGAGGAAAGGAGGATCCATCTGTGTTTCGTCATCATCGGAAAGCTGTTTATCGTCTCTGGATGCGAAGATGATGCACATGACCTTCTACTGGAGCACGAGCGTGACTCTCCTGATCGACTCGTGGAAGACCGAGTCGTGGGCGAGTTACGGTTTGACTCTACTCGCCTGCCTCATCGCCTCCGCCTTCTACCAGTACTTGGAAGATAGGCGCATCCGGCTCAAGCTCATCGCCGCCTCCGTCGGCTCTTCGCCAGCGTCGGCGTCTCCGATCGAGGAGCCTCTGCTTCAGTCAAAGATCGGGCGGTGGAGTGCGACGAAGTTCGCCGGGGCGGCGCTGTTCGGGATCAATTCGGCGATCGGGTACCTGATCATGCTGGCGGTGATGTCGTTCAACGGCGGAGTGTTTCTGGCGGTGGTCCTGGGGCTCGCGATCGGGTATTTACTGTTCAGAAGCGGAGACGGCGATGTTGCTGTCGTTGATAATGCTTGCGCCTGCGCGTAA 873 0.551 MAATVEAKAVSGIEIEMQSTSSAKHREVEFAKCDCCGLTEECTIEYIERVRERYQGRWICGLCAEAIKDEIVRSKRLISAEEALNRHMNFFKRFRSSNPPNHTESLISAVKQLLLRTLDSPRSLRKGGSICVSSSSESCLSSLDAKMMHMTFYWSTSVTLLIDSWKTESWASYGLTLLACLIASAFYQYLEDRRIRLKLIAASVGSSPASASPIEEPLLQSKIGRWSATKFAGAALFGINSAIGYLIMLAVMSFNGGVFLAVVLGLAIGYLLFRSGDGDVAVVDNACACA* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0196 290 Pfam Ctr copper transporter family 150 273 IPR007274 GO:0005375|GO:0016020|GO:0035434
Vvi4g0196 290 PANTHER OS01G0745000 PROTEIN 18 145 IPR012876 -
Vvi4g0196 290 Pfam Protein of unknown function (DUF1677) 28 116 IPR012876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0196 Vvi-Chr4 1702865 1708632 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0196 147 290 Inorganic Solute Cotransporters AT5G20650 55.782 1.03e-50 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0196 K14686 - vvi:100257698 284.648