Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0175 ATGGAAGGCTTGACTTCGAAGACCATGGCATTTTCTTTTGCCATATTGGTTGTCTATGGTCTCTTGAGAGCAGTTTACACCATTTGGTGGAGACCCAAAAGCCTAGAGAAGCAATTGAGGCAGCAAGGTATCAGAGGTACTCGTTACAAGCCCATGTATGGTGACATGAAAGCTTTGAAGCTGTCCTTCCAGGAGGCACAGTCCAAGCCCATGACCCTCAACCATTCTATTGTACCTCGTGTCATTCCATTCTTCCACCAAATGTTTCAAAATTATGGGAAGATTTCCATGAGTTGGATTTTCACAAGGCCAAGGGTGATGATAGTGGACCCAGAGCTGATCAGGATGATATTAGCAGACAAGAATGGCCAGTTCCAAAAGCCACCACTGAACCCTCTTGTGGATCTTCTAACCCTGGGACTCTCAACCTTGGAAGGAGAGCAGTGGGCCAAACGCAGAAAGCTAATCACACCTGCTTTCCACGTTGAGAAGTTGATGGGGATGGTGCCAGCATTTTCAATGAGTTGTTGCAATCTGATAGAACGATGGAAGAACTGGGTTGGTCCACAAGGAACATATGAACTGGATGTAATGCCTGAATTTCAAAACGTTACTGGGGATGTCATTTCTCGAGCAGCCTTTGGCAGTAGCTATGAAGAAGGAAAGAAAGTGTTTGAACTTCAAAAGGAACAAGCTGTGCTGGTCATTGAAGCTTCTCGAGCCATTTACTTGCCTGGATTCAGATTTGTGCCTACTGTGAAGAACAGGAGGAGATACCATATAGACAATGAGATCAAAGCCATGTTAAGATCAATGATTGACAGGAAAAAGCAGGCAATGAAGAATGGAGATTCGGGCTACAACGACGATTTATTAGGCTTGCTGCTGCAGCTCACAGAAGAAATTGACAATGAGATGAGAATCGAAGATCTGATAGAGGAATGCAAGTTGTTCTACTTTGCTGGCCAAGAGACAACTGCCAACTTGCTAACATGGACAATGATCCTCTTATCCATGAACCCCAAATGGCAGGACAAGGCAAGAGAAGAGGTTTTACAGATATGTGGGAAGAAAATACCTGATCTAGAAGCTATAAAGCACCTCAAAATTGTGTCAATGATACTACATGAAGTCCTAAGGCTATATCCATCAGTGGTTAATCTGCTTAGGTATACTCACAAAAGAACCGATGTAGCAGGCCTATCTATTCCAGCTGGGGTCGAGCTTTATTTACCAACAATACTTCTTCACCACAGCCCAGAGTATTGGGGGGATGATGTTGAAGAATTCAAGCCAGAGAGATTCTCTGAAGGAGTCTCAAAGGCATCAAAGGGTGATCAGATTGCATTCTATCCATTTGGGTGGGGGCCAAGGATCTGTTTGGGCCAAAGTTTTGCAATGATAGAAGCTAAGATGGCTCTAGCCATGATTCTGCAGAACTTTTGGTTTGAGCTCTCACCCACTTATACTCATGCTCCTTATACTGTTATCACACTTCAACCTCAATATGGAGCTCCAATTATACTACACCAAATCTGA 1539 0.4373 MEGLTSKTMAFSFAILVVYGLLRAVYTIWWRPKSLEKQLRQQGIRGTRYKPMYGDMKALKLSFQEAQSKPMTLNHSIVPRVIPFFHQMFQNYGKISMSWIFTRPRVMIVDPELIRMILADKNGQFQKPPLNPLVDLLTLGLSTLEGEQWAKRRKLITPAFHVEKLMGMVPAFSMSCCNLIERWKNWVGPQGTYELDVMPEFQNVTGDVISRAAFGSSYEEGKKVFELQKEQAVLVIEASRAIYLPGFRFVPTVKNRRRYHIDNEIKAMLRSMIDRKKQAMKNGDSGYNDDLLGLLLQLTEEIDNEMRIEDLIEECKLFYFAGQETTANLLTWTMILLSMNPKWQDKAREEVLQICGKKIPDLEAIKHLKIVSMILHEVLRLYPSVVNLLRYTHKRTDVAGLSIPAGVELYLPTILLHHSPEYWGDDVEEFKPERFSEGVSKASKGDQIAFYPFGWGPRICLGQSFAMIEAKMALAMILQNFWFELSPTYTHAPYTVITLQPQYGAPIILHQI* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0175 512 FunFam Cytochrome P450 734A1 29 512 - -
Vvi4g0175 512 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g0175 512 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g0175 512 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g0175 512 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g0175 512 PRINTS E-class P450 group I signature 89 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g0175 512 PRINTS E-class P450 group I signature 204 222 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g0175 512 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g0175 512 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g0175 512 SUPERFAMILY Cytochrome P450 78 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g0175 512 PANTHER CYTOCHROME P450 FAMILY MEMBER 21 505 - -
Vvi4g0175 512 Pfam Cytochrome P450 84 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g0175 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506|GO:0016705
Vvi4g0175 512 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g0175 512 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g0175 512 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g0175 512 PRINTS P450 superfamily signature 460 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g0175 512 Gene3D Cytochrome P450 28 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0175 Vvi-Chr4 1479669 1482394 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0175 3 512 Cytochrome P450 AT3G14690 47.758 3.53e-177 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0175 - - vvi:100254391 1018.84