Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0155 ATGAGTTTGGGCGCGGCCGAGGATGAAAATTCAACGTCGGAGATTCATATGCCGGCGGATGTAGATTGGCATATGCTTGATAAATCAAGGTTTTTCATCCTTGGTGCCGCTTTATTTTCCGGTGTGTCCGGCGCCCTTTATCCCATTGTAGTGCTAAAAACGCGACAACAGGTTTCGCCTTCGCAAATTTCTTGTTTCAGAATGTCCTATTCCATGTTGAACCACGAGGGTTTGAGAGGATTTTACAGAGGATTTGGCACATCCCTGATGGGAACAATCCCGGCTCGGGCCCTTTACATGGCTGCCCTTGAAGTCACTAAGAGTAATGTAGGAGCAGCAACTCTGAGAATAGGGTTTTCCGAAACAACTGCAGCAGCTATCGCTAATGCTGCTGCAGGGTTGAGTTCAGCCATGGCCGCCCAGCTTGTTTGGACTCCAATTGATGTAGTGAGCCAAAGGCTTATGGTTCAAGGCAGTAGCAAAACAATCATTCCCAATGTTAATGCATATAAGTATCGTGGTGGCATCGATGCATTCAGCAAAATTCTGTATTCTGATGGACTGCGAGGCCTATACAGGGGGTTCGGGATTTCGATATTGACTTACGCTCCATCAAATGCAGTTTGGTGGAGTACTTACTCTATAGCTCATAGGCTCATCTGGAGTGGGATTGGATGCTATTCCAGTAATAAAGATGAGAATGGTGGAGTCATAGGTTCCAGTTTTAGGCCGGATTCAAAGAGCATGGTGGCAGTTCAGGGGTTGAGCGCCGCCATGGCCAGTGGGGTTTCAGCTTTAATCACCATGCCACTTGATACAATTAAGACGAGATTGCAGGTTTTGGATGGAGAAGAAGGTGGATGTCGATCGCCAACCATTGGTCAGACAATTAAGAATTTGATGAAGGAAGGTGGACTTGGAGCTTGTTACAGAGGATTGGGGCCGAGGTGGGCTTCAATGTCGATGTCTGCAACAACCATGATCACTACCTATGAGTTCCTGAAAAGGCTATCTACTAAGAACCAATAG 1029 0.4674 MSLGAAEDENSTSEIHMPADVDWHMLDKSRFFILGAALFSGVSGALYPIVVLKTRQQVSPSQISCFRMSYSMLNHEGLRGFYRGFGTSLMGTIPARALYMAALEVTKSNVGAATLRIGFSETTAAAIANAAAGLSSAMAAQLVWTPIDVVSQRLMVQGSSKTIIPNVNAYKYRGGIDAFSKILYSDGLRGLYRGFGISILTYAPSNAVWWSTYSIAHRLIWSGIGCYSSNKDENGGVIGSSFRPDSKSMVAVQGLSAAMASGVSALITMPLDTIKTRLQVLDGEEGGCRSPTIGQTIKNLMKEGGLGACYRGLGPRWASMSMSATTMITTYEFLKRLSTKNQ* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0155 342 PRINTS Mitochondrial carrier protein signature 84 104 IPR002067 GO:0055085
Vvi4g0155 342 PRINTS Mitochondrial carrier protein signature 257 279 IPR002067 GO:0055085
Vvi4g0155 342 PRINTS Mitochondrial carrier protein signature 192 210 IPR002067 GO:0055085
Vvi4g0155 342 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 11 341 - -
Vvi4g0155 342 Gene3D Mitochondrial carrier domain 29 342 IPR023395 -
Vvi4g0155 342 ProSiteProfiles Solute carrier (Solcar) repeat profile. 124 219 IPR018108 -
Vvi4g0155 342 ProSiteProfiles Solute carrier (Solcar) repeat profile. 248 337 IPR018108 -
Vvi4g0155 342 Pfam Mitochondrial carrier protein 41 108 IPR018108 -
Vvi4g0155 342 Pfam Mitochondrial carrier protein 251 341 IPR018108 -
Vvi4g0155 342 Pfam Mitochondrial carrier protein 126 220 IPR018108 -
Vvi4g0155 342 SUPERFAMILY Mitochondrial carrier 25 334 IPR023395 -
Vvi4g0155 342 ProSiteProfiles Solute carrier (Solcar) repeat profile. 31 109 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0155 Vvi-Chr4 1289466 1290494 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0155 1 342 Chloroplast and Mitochondria Gene Families AT1G72820 69.565 7.70e-174 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0155 K15121 - vvi:100252641 649.818