Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0114 ATGCTACGGACAATTTCTCAATCTATGGCCACAACGAGTTGCGGCGGAACCGATTTAGAGACCTGCCGAGATGAGTCAGGCGCACTCACTCTCAAATTCGTCGCAATCGCCGCAATACTCGTCGCCGGCGTCTCTGGCGTCGCCATTCCCCTCGTGGGAAAGAAGCGCCGCTTCCTCCGCACCGATGGCAACCTCTTCTTCGCCGCCAAAGCCTTCGCCGCCGGCGTCATCCTCGCCACCGGCTTCGTCCACATGTTACCCGACGGTTCGACGGCGCTGTCCGACTCGTGCCTCCCCAAAAACCCCTGGTCCAAGTTCCCCTTCTCCGGCTTCTTCGCCATGGTCTCCGCCCTCGCCACCCTCGTCGTCGACTTCGTCGGAACCCAGTACTATGAACGCAAACAGGAGCGGACTCAGGCTAGTGAGGCCCGAGTCGGGCCTTCGGACTCAGACGGAATCGTCCCGTTTATCGAAGCTAAGGATCCCAACGGAAAGGTGTTTGGAGAAGAAGAAGGCGGAGGAATGCATATAGTGGGAATGCATGCTCACGCGGCGCACCATAGACACAACCACCCTCAAGGGGAGGAGTCTTGCGACGGCCGCCGCGGTGGCCACGATCACAGCCATGGACACGGCCACTCTCACGGGTTTGGGTTAGAAGATGGTGATGAGGAAGACGGCGGCATTCGACACGTTGTCGTTTCACAGGTACTGGAACTAGGAATCATATCCCACTCGGTGATAATAGGGCTATCACTGGGAGTGTCTCAGAGTCCATGCACCATAAGACCCTTAATAGCGGCATTGTCATTCCATCAGTTCTTCGAGGGCTTCGCCCTGGGAGGCTGCATCTCCCAAGCCCAGTTCAAGACCCTCTCCACTACCCTCATGGCCTGCTTCTTCGCCATCACCACCCCAGCAGGCATCGCCTTCGGCACGGCCATTTCTTCCTCCTACAATCCCGACAGCCCCCGGGCGCTGGTCATCGAAGGCATATTCGACTGCGTCTCAGCCGGCATCCTTATATACATGGCGCTGGTGGACTTGATTGCAGCGGACTTCCTGAGCAAGAGGATGAAGTGCAATGTTAGGCTCCAAGTCCTCTCATATTTGATGCTGTTTCTTGGAGCTGGCATGATGTCTGCTCTTGCCATCTGGGCTTAG 1164 0.573 MLRTISQSMATTSCGGTDLETCRDESGALTLKFVAIAAILVAGVSGVAIPLVGKKRRFLRTDGNLFFAAKAFAAGVILATGFVHMLPDGSTALSDSCLPKNPWSKFPFSGFFAMVSALATLVVDFVGTQYYERKQERTQASEARVGPSDSDGIVPFIEAKDPNGKVFGEEEGGGMHIVGMHAHAAHHRHNHPQGEESCDGRRGGHDHSHGHGHSHGFGLEDGDEEDGGIRHVVVSQVLELGIISHSVIIGLSLGVSQSPCTIRPLIAALSFHQFFEGFALGGCISQAQFKTLSTTLMACFFAITTPAGIAFGTAISSSYNPDSPRALVIEGIFDCVSAGILIYMALVDLIAADFLSKRMKCNVRLQVLSYLMLFLGAGMMSALAIWA* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0114 387 MobiDBLite consensus disorder prediction 189 222 - -
Vvi4g0114 387 Pfam ZIP Zinc transporter 30 384 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vvi4g0114 387 NCBIfam ZIP zinc/iron transport family 16 387 IPR004698 GO:0005385|GO:0016020|GO:0071577
Vvi4g0114 387 PANTHER ZINC/IRON TRANSPORTER 28 381 - -
Vvi4g0114 387 MobiDBLite consensus disorder prediction 188 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0114 Vvi-Chr4 1037778 1039262 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0114 5 387 Inorganic Solute Cotransporters AT1G10970 68.407 7.33e-174 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0114 K14709 - vvi:100244130 729.554