Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0100 ATGGGTGAGGAGGAGGGAGATGAGGGTGACCTAAGATCAAGAACGAGAGCATCAGGGCCGCCCAAATGGCTGACCAGCTTCCAGAAAGATCTGACGGCGGGAGCGGTGATGGGGGGTGTGGTGCACACGATCGTGGCCCCAATTGAGAGAGCCAAGCTTCTGCTGCAGACCCAGGAGAGCAACGTTGCTATCATCGCCGGCCGCCACCGGAGGTTCAAGGGCATGTGCGATTGTATCGTTCGTACGGTCAGGGAAGAGGGCATTCTCTCTCTGTGGAGGGGCAATGGGAGTAGCGTTTTACGTTATTACCCCTCCGTTGCTCTCAATTTCTCCCTTAAGGATCTTTACAAGAATATGCTGAGGTGCAGCAATTCTCTAGATGGTCATGTTACATATGGTGTGTCTGCCAACTTCATAGCAGGCGCTGCTGCAGGTTGTACAACACTAATTATCATCTACCCACTTGATATTGCACACACCCGCCTCGCTGCAGATGTTGGAAAAACTGAAGCTCGTCAGTTCCGTGGAATCTACCATTTCCTGAATACCATACTGAAGAAAGATGGGATTCAAGGGATCTACAGGGGGCTTCCTGCCTCCCTACATGGAATGGTTGTTCACAGGGGCCTTTACTTTGGGGGTTTTGACACAATCAAAGAAATGCTCTCAGAAGAATCCAAACCAGAGTTGGCATTATGGAAACGATGGGCGGCAGCACAAGCAGTGACAACATCTGCAGGGCTGTTGTCGTATCCATTGGACACAGTTCGAAGGCGAATGATGATGCAGTCAGGCTTGGAACGACCCATGTACAGAAGCACCTTGGAGTGCTGGAGGACGATCTATAGAACAGAGGGGGTGGCTTCATTTTACCGTGGGGCGGTTTCAAACATGTTTAGGAGTACTGGGGGTGCTGCCATTTTGGTTTTGTACGATGAAGTGAAGAAGTTCATGAATTGGAGCGGATTCTAA 972 0.5051 MGEEEGDEGDLRSRTRASGPPKWLTSFQKDLTAGAVMGGVVHTIVAPIERAKLLLQTQESNVAIIAGRHRRFKGMCDCIVRTVREEGILSLWRGNGSSVLRYYPSVALNFSLKDLYKNMLRCSNSLDGHVTYGVSANFIAGAAAGCTTLIIIYPLDIAHTRLAADVGKTEARQFRGIYHFLNTILKKDGIQGIYRGLPASLHGMVVHRGLYFGGFDTIKEMLSEESKPELALWKRWAAAQAVTTSAGLLSYPLDTVRRRMMMQSGLERPMYRSTLECWRTIYRTEGVASFYRGAVSNMFRSTGGAAILVLYDEVKKFMNWSGF* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0100 323 MobiDBLite consensus disorder prediction 1 21 - -
Vvi4g0100 323 Pfam Mitochondrial carrier protein 133 224 IPR018108 -
Vvi4g0100 323 Pfam Mitochondrial carrier protein 230 319 IPR018108 -
Vvi4g0100 323 Pfam Mitochondrial carrier protein 26 121 IPR018108 -
Vvi4g0100 323 PRINTS Mitochondrial carrier protein signature 147 165 IPR002067 GO:0055085
Vvi4g0100 323 PRINTS Mitochondrial carrier protein signature 43 57 IPR002067 GO:0055085
Vvi4g0100 323 PRINTS Mitochondrial carrier protein signature 239 261 IPR002067 GO:0055085
Vvi4g0100 323 PRINTS Mitochondrial carrier protein signature 94 114 IPR002067 GO:0055085
Vvi4g0100 323 PRINTS Mitochondrial carrier protein signature 194 212 IPR002067 GO:0055085
Vvi4g0100 323 PRINTS Mitochondrial carrier protein signature 30 43 IPR002067 GO:0055085
Vvi4g0100 323 PRINTS Adenine nucleotide translocator signature 72 93 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vvi4g0100 323 PRINTS Adenine nucleotide translocator signature 27 39 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vvi4g0100 323 PRINTS Adenine nucleotide translocator signature 105 117 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vvi4g0100 323 PRINTS Adenine nucleotide translocator signature 132 145 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vvi4g0100 323 PRINTS Adenine nucleotide translocator signature 235 251 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vvi4g0100 323 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 26 321 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vvi4g0100 323 SUPERFAMILY Mitochondrial carrier 25 313 IPR023395 -
Vvi4g0100 323 ProSiteProfiles Solute carrier (Solcar) repeat profile. 234 317 IPR018108 -
Vvi4g0100 323 ProSiteProfiles Solute carrier (Solcar) repeat profile. 25 119 IPR018108 -
Vvi4g0100 323 Gene3D Mitochondrial carrier domain 29 320 IPR023395 -
Vvi4g0100 323 ProSiteProfiles Solute carrier (Solcar) repeat profile. 132 221 IPR018108 -
Vvi4g0100 323 FunFam probable ADP,ATP carrier protein At5g56450 29 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0100 Vvi-Chr4 935962 939104 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0100 27 316 Antiporters AT5G17400 40.541 3.32e-69 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0100 K05863 - vvi:100266251 651.744