Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0097 ATGGATGCAGCCCTCCAAGGTTTGATACAGATTGGGGTGTCCTTCATAAGGACACCCATGGCACCAGCCTTCTTCACAGTGTTGGCTATGCTAGGAGGACTTTTGGGCTACTTGTATGAACCCTATTGGAGGGTGAGAAGGGTACCAGGTCCACCAGTCTTCCCTCTTGTTGGGCACCTCCCCTTGATGGCCAAGTATGGTCATGATGTGTTCTCAGTCCTTGCCAAAAAATATGGTCCAATTTTCAGGTTCCATGTGGGTAGACAGCCCCTGGTGATTGTAGCAGATGCAGAGCTCTGTAGAGAAGTTGGAATAAAGAAATTCAAAGACATTCCCAACAGAAGCATTCCCTCTGCCATCTCAGCATCCCCTCTCCACCAAAAGGGTCTCTTCTTCACCAGGGATGCAAGGTGGTCAACAATGAGAAACACCATAATATCAGTCTACCAGCAATCTCACCTAGCCAACCTGGTGCCAACCATGCAAGCATTCATTGAACCAGCCTTTCGAAATCTCCCGTCTTCTGAAGAGGAAGATATCACTTTTTCCAATTTGTCCCTCAAACTGGCCACTGATGTAATTGGGCAAGCTGCATTTGGGGTTCATTTTGGTCTCTCCAAACCACCATCCAGCAATGAAGTTAAGAACAGTGATGAAGTATCAGAGTTCATCAATCAACATATTTACTCTACCACAAATCTTAAGATGGATCTATCAGGATCTTTCTCAATTATACTAGGCCTACTTGTCCCCATTCTCCAAAAACCAGTTCAACATATCCTTAAGAGAATACCTGGGACGATGGACTGGAAAATTTACCAGACTAACAAGAAACTGAGCAGCAGGCTTGATGAGATTGTTGCAAAGAGAATGAAGGACAAGGATAGAGGTTCCAAGGACTTCTTGTCTCTCATATTGAATGCAAGGGAATCAGAGAAAGCCATGAAGAATATTTTCACCTCAGACTACCTTAATGCAGTTACTTATGAACACCTACTTGCTGGGTCTGCAACAACATCCTTCACATTGTCTTCAACTATCTATCTGATTGCCGAGCATCCAGAAGTGGAGAAGAAGTTGCTTGCAGAGATTGACGGGTTCGGTCCGCCTGATCAGATGCCAACAGCTCATGATCTCCAGCACAAATTCCCCTATCTTGATCAGGCAAAGTCTCTTGTTGTTAAAGAGGCAATGAGGTTTTATACAGTTTCCCCATTAGTTGCAAGAGAAACATCTGCAGAAGTAGAGATTGGAGGCTATGTTCTTCCCAAGGGCACATGGATCTGGTTGGCACCTGGGGTTCTAGCAAAAGATCCAAAAAATTTCCCGGAACCAGACAAGTTCAAGCCAGAGAGGTTTGACCCAAATTGTGAGGAGGAGAAACAAAGGCATCCTTATGCTCTCATACCCTTTGGAATTGGTCCTCGAGCATGTCTAGGCCAGAAGTTCTCCTTACAAGAAGTAAAGCTTTCGCTGATTCATCTATACCAAAGATATGTCTTTCGCCATTCCCCAAACATGGAGAAACCTCTGGAACTTGAGTATGGCATAATTCTCAACTTCAAACATGCTGTCAAGCTCAGAGCCATCAAACGACATCCATGA 1605 0.4461 MDAALQGLIQIGVSFIRTPMAPAFFTVLAMLGGLLGYLYEPYWRVRRVPGPPVFPLVGHLPLMAKYGHDVFSVLAKKYGPIFRFHVGRQPLVIVADAELCREVGIKKFKDIPNRSIPSAISASPLHQKGLFFTRDARWSTMRNTIISVYQQSHLANLVPTMQAFIEPAFRNLPSSEEEDITFSNLSLKLATDVIGQAAFGVHFGLSKPPSSNEVKNSDEVSEFINQHIYSTTNLKMDLSGSFSIILGLLVPILQKPVQHILKRIPGTMDWKIYQTNKKLSSRLDEIVAKRMKDKDRGSKDFLSLILNARESEKAMKNIFTSDYLNAVTYEHLLAGSATTSFTLSSTIYLIAEHPEVEKKLLAEIDGFGPPDQMPTAHDLQHKFPYLDQAKSLVVKEAMRFYTVSPLVARETSAEVEIGGYVLPKGTWIWLAPGVLAKDPKNFPEPDKFKPERFDPNCEEEKQRHPYALIPFGIGPRACLGQKFSLQEVKLSLIHLYQRYVFRHSPNMEKPLELEYGIILNFKHAVKLRAIKRHP* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0097 534 PANTHER THROMBOXANE-A SYNTHASE 20 533 - -
Vvi4g0097 534 Pfam Cytochrome P450 49 514 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g0097 534 SUPERFAMILY Cytochrome P450 42 532 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g0097 534 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 471 480 IPR017972 GO:0005506|GO:0016705
Vvi4g0097 534 PRINTS E-class P450 group I signature 468 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g0097 534 PRINTS E-class P450 group I signature 478 501 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g0097 534 PRINTS E-class P450 group I signature 431 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g0097 534 PRINTS E-class P450 group I signature 189 207 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g0097 534 PRINTS E-class P450 group I signature 391 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g0097 534 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g0097 534 PRINTS E-class P450 group I signature 343 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g0097 534 PRINTS E-class P450 group I signature 323 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g0097 534 Gene3D Cytochrome P450 38 533 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g0097 534 FunFam Cytochrome P450 3A4 37 533 - -
Vvi4g0097 534 PRINTS P450 superfamily signature 392 403 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g0097 534 PRINTS P450 superfamily signature 469 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g0097 534 PRINTS P450 superfamily signature 334 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g0097 534 PRINTS P450 superfamily signature 478 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0097 Vvi-Chr4 916173 919492 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0097 86 532 Cytochrome P450 AT2G26170 72.483 0.0 639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0097 K20771 - vvi:100243924 1036.94