Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0096 ATGACAGGTTCGGCCTGCCTGATCAGATGCCCACAGCTCATGATCTCCACCACAAACTCCCCTATCTTGATCAGGCAAAAGGCAATGAGGTTTTATACACTCACCCCATTAATTGGGAGAAACATCCACACAAGTAGAGATAGGAGGTTATGTTCTCCCAAAGGGCTCCTGGATCTGGATGGCACCAGGGGTTCTAGCAAAAGATCCAAAAAGTTTCCCAGAACCGGACAAGTTCAGCTAGAGAGGTTTGATCCAAATTGTGAGGAGAAGAAACAAAGGCATCTTTATACTTACATACCCTTTGGAATTGGGCCTCGAGCATGCCTAGGCCAGAAGTTCTCCTTGCTAGAAATAAAGCTCACACTGATTCATCTATACCAAAACCATGTATTTTCACCATTCCCCCAAGATTGA 414 0.4517 MTGSACLIRCPQLMISTTNSPILIRQKAMRFYTLTPLIGRNIHTSRDRRLCSPKGLLDLDGTRGSSKRSKKFPRTGQVQLERFDPNCEEKKQRHLYTYIPFGIGPRACLGQKFSLLEIKLTLIHLYQNHVFSPFPQD* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0096 137 PANTHER THROMBOXANE-A SYNTHASE 28 132 - -
Vvi4g0096 137 Pfam Cytochrome P450 67 135 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g0096 137 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 101 110 IPR017972 GO:0005506|GO:0016705
Vvi4g0096 137 Gene3D Cytochrome P450 26 137 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g0096 137 SUPERFAMILY Cytochrome P450 81 135 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0096 Vvi-Chr4 914986 915564 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0096 24 131 Cytochrome P450 AT2G26170 47.748 1.23e-29 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0096 K20771 - vvi:100249079 233.032