Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0081 ATGCTTGAATCCTCGGCGTTTGTGCCAATGGTGCCACTCCGGCAGCCCCCTCCATCTTCGTCACCGCCACCAACTTCTGCCCGCCGGGCTACGCTCTTCCCAGCTACAATGGCGGCTGATGCAACTCTCCTTGTCCTCACTTCAACCTTGCCATGCCCGTGCTTCTCGAGATCGCCGGGTACCGGGCCCGAATTATCCCCGTTGTCCTCCGTCGTGTACCCTGCTGGAAGAGTGGCTGCTTGTAGAGCTGGTTCAGCTATCCCGCTGTCCACTGATCACAAACCTGATAGATCTGACGAACGTCAAAGGATTGAAGACGCTGGAGGTTTCATTATTTGGGCAGGAACCTGGCGGGTTGGTGGTGTTCTTGCTGTTTCTCGTGCATGA 387 0.5659 MLESSAFVPMVPLRQPPPSSSPPPTSARRATLFPATMAADATLLVLTSTLPCPCFSRSPGTGPELSPLSSVVYPAGRVAACRAGSAIPLSTDHKPDRSDERQRIEDAGGFIIWAGTWRVGGVLAVSRA* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0081 128 PANTHER PROTEIN PHOSPHATASE 77 128 IPR015655 GO:0004722|GO:0006470
Vvi4g0081 128 Gene3D - 76 128 IPR036457 -
Vvi4g0081 128 ProSiteProfiles PPM-type phosphatase domain profile. 1 128 IPR001932 -
Vvi4g0081 128 Pfam Protein phosphatase 2C 81 128 IPR001932 -
Vvi4g0081 128 MobiDBLite consensus disorder prediction 1 28 - -
Vvi4g0081 128 SUPERFAMILY PP2C-like 77 128 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0081 Vvi-Chr4 814858 815244 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0081 77 128 PP2C-type Phosphatase Gene Family AT1G43900 88.462 5.84e-28 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0081 K17506 - vvi:104879041 221.476