Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi4g0031 | ATGCCGAAACTACCCTTATTATTTGCCACAACTCCATTCCCCACCCTGTTCTTCCTCCTCATCCTCTCCATATTTCAGGTAATTTCTCAAAATTTGGACGATGAACGATCAATCCTACTAGACGTTAAACAACAATTGGGCAATCCACCGTCACTCCAATCGTGGAATTCCTCATCCTTGCCTTGTGATTGGCCGGAAATTACATGCACCGACAATACCGTCACTGCAATTTCACTCCACAATAAGACCATCAGAGAGAAAATTCCAGCCACAATTTGTGACCTCAAGAACCTCATCGTACTTGACCTCTCCAACAATTACATTGTCGGTGAGTTCCCGGATATTCTCAATTGTTCCAAGCTTGAGTATCTGCTCTTGTTGCAAAACTCCTTCGTAGGTCCAATTCCAGCTGATATTGATCGACTTTCACATCTCCGGTACCTAGACCTCACCGCAAACAACTTCTCTGGAGATATTCCCGCAGCAATTGGGAGGCTACGGGAACTGTTCTACTTGTTTCTGGTTCAAAATGAGTTCAACGGCACCTGGCCAACGGAGATAGGTAATTTGGCGAATCTTGAACATTTGGCCATGGCCTATAATGACAAATTCCGGCCTTCAGCCCTTCCAAAAGAGTTTGGCGCATTGAAAAAGCTGAAATATCTGTGGATGACGCAGGCGAATTTGATTGGCGAAATACCGAAGAGCTTCAACCATCTGTCGAGTCTAGAACACTTGGATCTCTCACTCAACAAATTAGAAGGTACGATCCCTGGAGGTTTTGGGAAGCTACAAAATTTGACCGGTTTGAATCTTTTCTGGAATCAGTTGTCAGGAGAGATACCAGTAAATATAAGCCTCATTCCTACACTAGAAACTTTCAAAGTTTTTAGCAATCAATTGAGTGGAGTTTTGCCTCCAGCATTTGGCCTTCATTCAGAGCTCAAACGTTTTGAGGTTTCCGAGAATAAACTAAGCGGGGAATTACCTCAACATTTATGCGCTAGGGGGGTTTTGCTTGGAGTGGTTGCTTCCAACAACAATCTCAGCGGGGAAGTGCCCAAGTCTCTCGGGAATTGCAGAAGTTTGCTCACCATTCAGCTTTCCAACAATCGCTTTTCAGGTGAGATTCCTTCTGGCATCTGGACATCCCCGGACATGATATGGGTGATGTTAGCTGGAAATTCATTCTCGGGGACACTTCCAAGTAAATTGGCAAGGAATTTGTCTAGAGTGGAGATTAGTAACAACAAGTTTTCTGGTCCAATTCCTGCTGAAATCTCTTCTTGGATGAACATAGCTGTGCTCAATGCCAGCAACAATATGTTGTCAGGAAAAATTCCAATGGAATTAACCAGTCTTCGAAACATCTCTGTTTTGTTGCTTGATGGGAATCAATTCTCGGGTGAGCTTCCATCTGAGATCATCTCATGGAAGTCGCTCAATAATTTGAATCTCTCAAGAAACAAACTTTCTGGCCCAATTCCCAAGGCATTAGGTTCTTTACCTAACCTCAATTACCTTGACTTGTCAGAAAACCAGTTCTCGGGTCAAATTCCTCCTGAACTTGGTCATTTGACGCTTAATATCCTCGATCTATCATTCAACCAACTCTCTGGGATGGTCCCCATTGAGTTTCAATATGGAGGATATGAACACAGTTTCTTGAATGATCCCAAGCTGTGTGTCAATGTTGGCACTCTGAAACTCCCTAGATGTGATGCCAAAGTCGTTGACTCTGACAAATTGTCAACCAAATATCTCGTTATGATCCTAATTTTCGTTGTATCTGGTTTCCTAGCTATTGTTTTGTTCACCCTGCTCATGATTCGAGATGATAATAGGAAGAATCACAGTCGAGACCATACACCTTGGAAGGTTACTCAATTCCAAACACTAGATTTCAATGAACAGTACATATTGACCAATTTGACAGAAAATAATTTGATCGGACGCGGTGGGTCAGGGGAAGTATACCGAATTGCTAATAACCGTTCTGGTGAACTCCTGGCGGTTAAAAAGATTTGTAATAACAGGAGATTGGATCACAAGTTTCAGAAACAATTCATAGCAGAAGTCGAGATATTGGGCACCATACGCCATTCCAATATAGTGAAGTTGTTGTGTTGCATATCGAATGAAAGCTCAAGCCTTCTTGTTTATGAGTACATGGAGAAGCAGAGTTTGGATAGATGGCTTCATGGGAAGAAGCAGAGAACAACGTCCATGACAAGTTCAGTCCATAACTTTGTCTTGGATTGGCCAACAAGGTTGCAGATTGCTATCGGAGCTGCAAAAGGCCTATGCCACATGCATGAAAACTGCTCTGCCCCGATCATACATCGAGATGTGAAGTCCAGCAACATCTTGCTAGATGCCGAGTTCAACGCGAAAATTGCGGATTTTGGATTGGCCAAGATGTTGGTCAAGCAAGGAGAGGCCGACACCATGTCAGGAGTTGCAGGCTCTTACGGATATATTGCCCCTGAGTATGCTTATACAACAAAGGTGAACGAGAAGATCGATGTATATAGCTTTGGAGTAGTCCTGCTTGAGCTAGTGACGGGGAGAGAACCCAACAGCAGGGACGAGCACATGTGCCTTGTAGAATGGGCATGGGATCAATTCAAAGAAGAAAAAACCATTGAGGAAGTGATGGATGAGGAGATCAAGGAACAATGTGAAAGAGCACAAGTGACCACTCTCTTCAGTCTAGGCCTCATGTGCACTACCAGATCACCATCCACTAGGCCCACAATGAAGGAGGTTTTGGAAATTCTTCGACAGTGCAGTCCTCAGGAGGGCCATGGAAGAAAGAAAAAGGACCATGAAGCTGCACCCCTGCTTCAAAATGGCACTTACCCCGCTACTTACAAGCATAGCGAGAAGGAATCAGACAATGAGGATGACGATAACTTCATTTGA | 2925 | 0.4373 | MPKLPLLFATTPFPTLFFLLILSIFQVISQNLDDERSILLDVKQQLGNPPSLQSWNSSSLPCDWPEITCTDNTVTAISLHNKTIREKIPATICDLKNLIVLDLSNNYIVGEFPDILNCSKLEYLLLLQNSFVGPIPADIDRLSHLRYLDLTANNFSGDIPAAIGRLRELFYLFLVQNEFNGTWPTEIGNLANLEHLAMAYNDKFRPSALPKEFGALKKLKYLWMTQANLIGEIPKSFNHLSSLEHLDLSLNKLEGTIPGGFGKLQNLTGLNLFWNQLSGEIPVNISLIPTLETFKVFSNQLSGVLPPAFGLHSELKRFEVSENKLSGELPQHLCARGVLLGVVASNNNLSGEVPKSLGNCRSLLTIQLSNNRFSGEIPSGIWTSPDMIWVMLAGNSFSGTLPSKLARNLSRVEISNNKFSGPIPAEISSWMNIAVLNASNNMLSGKIPMELTSLRNISVLLLDGNQFSGELPSEIISWKSLNNLNLSRNKLSGPIPKALGSLPNLNYLDLSENQFSGQIPPELGHLTLNILDLSFNQLSGMVPIEFQYGGYEHSFLNDPKLCVNVGTLKLPRCDAKVVDSDKLSTKYLVMILIFVVSGFLAIVLFTLLMIRDDNRKNHSRDHTPWKVTQFQTLDFNEQYILTNLTENNLIGRGGSGEVYRIANNRSGELLAVKKICNNRRLDHKFQKQFIAEVEILGTIRHSNIVKLLCCISNESSSLLVYEYMEKQSLDRWLHGKKQRTTSMTSSVHNFVLDWPTRLQIAIGAAKGLCHMHENCSAPIIHRDVKSSNILLDAEFNAKIADFGLAKMLVKQGEADTMSGVAGSYGYIAPEYAYTTKVNEKIDVYSFGVVLLELVTGREPNSRDEHMCLVEWAWDQFKEEKTIEEVMDEEIKEQCERAQVTTLFSLGLMCTTRSPSTRPTMKEVLEILRQCSPQEGHGRKKKDHEAAPLLQNGTYPATYKHSEKESDNEDDDNFI* | 975 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi4g0031 | 974 | FunFam | Receptor-like protein kinase HSL1 | 624 | 723 | - | - | |
Vvi4g0031 | 974 | ProSitePatterns | Protein kinases ATP-binding region signature. | 650 | 674 | IPR017441 | GO:0005524 | |
Vvi4g0031 | 974 | Pfam | Leucine rich repeat N-terminal domain | 33 | 69 | IPR013210 | - | |
Vvi4g0031 | 974 | Gene3D | Ribonuclease Inhibitor | 286 | 576 | IPR032675 | - | |
Vvi4g0031 | 974 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED | 591 | 930 | - | - | |
Vvi4g0031 | 974 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 779 | 791 | IPR008271 | GO:0004672|GO:0006468 | |
Vvi4g0031 | 974 | FunFam | - | 682 | 872 | - | - | |
Vvi4g0031 | 974 | MobiDBLite | consensus disorder prediction | 931 | 974 | - | - | |
Vvi4g0031 | 974 | Gene3D | Ribonuclease Inhibitor | 32 | 206 | IPR032675 | - | |
Vvi4g0031 | 974 | SMART | LRR_typ_2 | 95 | 118 | IPR003591 | - | |
Vvi4g0031 | 974 | SMART | LRR_typ_2 | 264 | 288 | IPR003591 | - | |
Vvi4g0031 | 974 | SMART | LRR_typ_2 | 502 | 526 | IPR003591 | - | |
Vvi4g0031 | 974 | SMART | LRR_typ_2 | 142 | 166 | IPR003591 | - | |
Vvi4g0031 | 974 | SMART | LRR_typ_2 | 454 | 478 | IPR003591 | - | |
Vvi4g0031 | 974 | SMART | LRR_typ_2 | 240 | 263 | IPR003591 | - | |
Vvi4g0031 | 974 | Gene3D | Transferase(Phosphotransferase) domain 1 | 724 | 952 | - | - | |
Vvi4g0031 | 974 | FunFam | Uncharacterized protein | 208 | 286 | - | - | |
Vvi4g0031 | 974 | Pfam | Protein kinase domain | 646 | 925 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi4g0031 | 974 | SUPERFAMILY | Protein kinase-like (PK-like) | 630 | 927 | IPR011009 | - | |
Vvi4g0031 | 974 | MobiDBLite | consensus disorder prediction | 932 | 946 | - | - | |
Vvi4g0031 | 974 | SMART | serkin_6 | 644 | 926 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi4g0031 | 974 | Gene3D | Phosphorylase Kinase; domain 1 | 626 | 723 | - | - | |
Vvi4g0031 | 974 | Gene3D | Ribonuclease Inhibitor | 208 | 284 | IPR032675 | - | |
Vvi4g0031 | 974 | FunFam | Uncharacterized protein | 287 | 576 | - | - | |
Vvi4g0031 | 974 | Pfam | Leucine rich repeat | 234 | 277 | IPR001611 | GO:0005515 | |
Vvi4g0031 | 974 | FunFam | Receptor-like protein kinase HSL1 | 32 | 186 | - | - | |
Vvi4g0031 | 974 | ProSiteProfiles | Leucine-rich repeat profile. | 97 | 119 | IPR001611 | GO:0005515 | |
Vvi4g0031 | 974 | SUPERFAMILY | RNI-like | 60 | 382 | - | - | |
Vvi4g0031 | 974 | SUPERFAMILY | L domain-like | 329 | 546 | - | - | |
Vvi4g0031 | 974 | ProSiteProfiles | Protein kinase domain profile. | 644 | 946 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi4g0031 | Vvi-Chr4 | 366545 | 369703 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vvi4g0031 | 34 | 964 | Receptor kinase-like Gene Family | AT5G25930 | 52.792 | 0.0 | 968 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Vvi4g0031 | Pkinase | 3.2e-50 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi4g0031 | K00924 | - | vvi:100250973 | 1651.34 |