Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi4g0023 | ATGAGGACCATGGAAGAAAGAAAAAGGACCATGAAGCTGCACCTGAACATACATCGAGATGTAAAGTCCAGCAACATCTTACTAGACGCTGAGTTCAACGCGAAAATTGTAGATTTTGGATTACCCAAGATGTTGGTCAAGCAAGGAGAGCCCGATACCATGTCAGGAGTTGCAGGCTCTTACAGATATATTGCCCCCGAGTATGCTTATACACCAAAGGTGAAGGAGAAGACCGATGTATATAGCTTTGGAGTAGTTCTTCTTGAGCTGGTGACGGGGAGAGAACCTAACAGCGAGCACATGTGCCTTGTAGAATGGGCATGGGATCAGTTTAGAGAAGGGAAAACCATTGAGGAAGTGGTGGATGAGGAGATCAAAGAACAATGTGACAGAGCACAAGTGACCACTTTCTTCAATCTAGGCCTCATGTGCACTACCACATTACCATCCACTAGGCCAACAATGAAGGAGGTTTTGGAAATTCTTCGACTGTGCAGTCCTCAGGAGGACCATGGAAGAAAGAAAAAAGACCATGAAGCTGCACCCCTGCTTCTAAATGGCACTTAA | 567 | 0.455 | MRTMEERKRTMKLHLNIHRDVKSSNILLDAEFNAKIVDFGLPKMLVKQGEPDTMSGVAGSYRYIAPEYAYTPKVKEKTDVYSFGVVLLELVTGREPNSEHMCLVEWAWDQFREGKTIEEVVDEEIKEQCDRAQVTTFFNLGLMCTTTLPSTRPTMKEVLEILRLCSPQEDHGRKKKDHEAAPLLLNGT* | 189 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi4g0023 | 188 | SUPERFAMILY | Protein kinase-like (PK-like) | 17 | 164 | IPR011009 | - | |
Vvi4g0023 | 188 | Pfam | Protein kinase domain | 17 | 160 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi4g0023 | 188 | SMART | serkin_6 | 2 | 164 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi4g0023 | 188 | ProSiteProfiles | Protein kinase domain profile. | 1 | 164 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi4g0023 | 188 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 | 17 | 163 | - | - | |
Vvi4g0023 | 188 | Gene3D | Transferase(Phosphotransferase) domain 1 | 10 | 184 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi4g0023 | Vvi-Chr4 | 241463 | 242123 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vvi4g0023 | 17 | 186 | Receptor kinase-like Gene Family | AT5G25930 | 63.429 | 7.41e-63 | 207 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Vvi4g0023 | Pkinase | 3.8e-23 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi4g0023 | - | K00924 | vvi:109122498 | 384.415 |