Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1312 ATGGGGTATGAAGAGTGGAAACCATATATACTGTGTGTGTTCTCTAATATCTGTTTTGCAGGTTTTAACATTGTGTCAAAGGTCTCCCTGGACAAAGGCATGAGCCGCTACGTGCTGGTTGTCTATGGACATGCTTTTGGAACTTTAGCCACTGCACTTCTTGTTCTTCTCTTTGAAAGAAACAATAAAGGCAAAATGAGCATGGCAGTCTTGCGGGACATCTTCTTTCTGGGACTTCTAGGCGCTGTATTAGGACGGACGCTATATTATGCGGGAATGGAGTATACTTCACCAGCTTTTGCATCCGCCATGGGCAACTTGATTCCATCATTTACCTTTGTCTTGGCACTTCTTTGCCGGATGGAGAAATTGGAAATTTGGAATGTGAGTTCCCAAGCCAAGATAGGAGGAACTCTTGTGGCCCTCGCTGGTGCAACGCTGATGACAATATACAAGGGAATTGTGGTGATTTCACCCCACACTAGACGTTCACATGAGCCTGCAGCCACCTCTTCAAGAGCATTCCTAGATTGGGAGTGGATAAAGGGCTCCCTCATGCTTGCAACTTCATCCCTTTCATTCGCAGCGTTCTACATCCTACAGACTACAACACTTAAGAAGTATCCAGCGCCTCTTACTATAACGTGGTTAATGTGCTTATCAGGGACTTTGTTGGCAGCAATCATGACACTGATTTTCGATCACAAAGTCTCTTCATGGAGGTTGTCATGGGACATCTCCCTAATCGCTCCCATATACTGCGGAATTATGATTTATGGAGTTACAACTTTTGTTCAAATGTTGGTAATCCAAAAAAAAGATCTAGTTTTTGTGACGGCATTTAGACCACTATCCACGATACTTGTAACATTGATGGGCTTAGTTATTTTAAGAGATGCACTATTCTTGGGAAGGTATGCAATCTCATCATTTAATTGA 939 0.4302 MGYEEWKPYILCVFSNICFAGFNIVSKVSLDKGMSRYVLVVYGHAFGTLATALLVLLFERNNKGKMSMAVLRDIFFLGLLGAVLGRTLYYAGMEYTSPAFASAMGNLIPSFTFVLALLCRMEKLEIWNVSSQAKIGGTLVALAGATLMTIYKGIVVISPHTRRSHEPAATSSRAFLDWEWIKGSLMLATSSLSFAAFYILQTTTLKKYPAPLTITWLMCLSGTLLAAIMTLIFDHKVSSWRLSWDISLIAPIYCGIMIYGVTTFVQMLVIQKKDLVFVTAFRPLSTILVTLMGLVILRDALFLGRYAISSFN* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1312 312 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 150 - -
Vvi3g1312 312 PANTHER WAT1-RELATED PROTEIN 8 305 IPR030184 GO:0016020|GO:0022857
Vvi3g1312 312 Pfam EamA-like transporter family 7 148 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1312 Vvi-Chr3 19106479 19114184 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g1312 7 304 Nodulin-like Gene Family AT5G07050 41.967 1.11e-77 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1312 - - vri:117911045 585.489