Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1297 ATGGGGCTGGGGAGAATAGGACTAGCACGTGACACCCAAATACCATATTCTCAAAATCAGAAAATAAATTCACGAATCGAGGGAAACCCTAGGAGAGAGAGGAGAGAATGGGGAAGAAGAAGAAGAGAGCAGCGAAGGTGTTTTGCTACTACTGCGAGAGGGAGTTCGAGGACGAGAAGATTCTTGTTCAGCACCAGAAGGCCAAGCACTTCAAGTGCCATGTCTGCAACAAGAAGCTCTCCACCGCCTCTGGCATGGCCATCCACGTCCTCCAGAGTTCCTAATGCTAATCCCGGGAGAGAATCCACTGAAATTGAAATATTTGGAATGCAAGGAATCCCAGATGATATTCTAGCTGCCCATTACGGAGAGCAAGATGAAGATAACCCTTCAAAGCTAGCCAAAGTCGAGGTCCCACCAACTAACGTTGTTGGTGTGATGCCTCCTGGATCAGTGGGCATGGGGTTTCCGCCGCAATCAACATTTGGTGCAATACCACCAATTTACAATTCTGCAGTTGCAGTCCCTCCTGGTTGGCCGGTTCCTCGTCCACAGCCTTGGTTCCCACAGCATCCAGCAGTTCCTGTTCCTCCTGCTGCACCCTTAGGACTCGCACAAAGGCCTTTGTTTCCCATACAAAATGTGACACCTCCTCTGCCATCTGCTACACTTCAACCTTCATTTCAAACTACACCACCTGGACCTCTCTCATCTAGTCCTACTCCTGTATCTCAGCCCTTATTTCCTGTTGTTGGTACTGCAAGTATTCCTAGTCAAAATTCACAAGTTACTGCAGCTGCATTGTCGGCCCCCATTACATCAAGCACCCCTTCAGAACTCAATAACCCTTCATACTCCAGTATTAACACATCTATGGTAAATGGCTACCATGCTCCAAGTATTCAAGCAGGGACATTAGTCAGTTCACATACATATGCTTCCGGTTCAAACACCAGTGGCCCATCGATTGGACCCCCACCGATGATAGCAAACAAAGCTCCGGTAATCCAGCCAGCAAGTAATGAGGTCTACCTTGTATGGGATGATGAGGCGATGTCCATGGAGGAAAGAAGGATGTCATTACTGAAGTATCAGGTGCATGATGAAACTAGCCAGATGAACTCAGTTGATGCAGCCATTGACAGGAGGATATCTGAGGGCAGACTTGCTGGTCGAATGGCTTTCTAG 1188 0.4806 MGLGRIGLARDTQIPYSQNQKINSRIEGNPRRERREWGRRRREQRRCFATTARGSSRTRRFLFSTRRPSTSSAMSATRSSPPPLAWPSTSSRVPNANPGRESTEIEIFGMQGIPDDILAAHYGEQDEDNPSKLAKVEVPPTNVVGVMPPGSVGMGFPPQSTFGAIPPIYNSAVAVPPGWPVPRPQPWFPQHPAVPVPPAAPLGLAQRPLFPIQNVTPPLPSATLQPSFQTTPPGPLSSSPTPVSQPLFPVVGTASIPSQNSQVTAAALSAPITSSTPSELNNPSYSSINTSMVNGYHAPSIQAGTLVSSHTYASGSNTSGPSIGPPPMIANKAPVIQPASNEVYLVWDDEAMSMEERRMSLLKYQVHDETSQMNSVDAAIDRRISEGRLAGRMAF* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1297 395 MobiDBLite consensus disorder prediction 26 44 - -
Vvi3g1297 395 MobiDBLite consensus disorder prediction 218 232 - -
Vvi3g1297 395 MobiDBLite consensus disorder prediction 21 44 - -
Vvi3g1297 395 MobiDBLite consensus disorder prediction 65 99 - -
Vvi3g1297 395 MobiDBLite consensus disorder prediction 218 242 - -
Vvi3g1297 395 PANTHER ZINC FINGER PROTEIN 207 91 395 - -
Vvi3g1297 395 MobiDBLite consensus disorder prediction 65 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1297 Vvi-Chr3 18906550 18917166 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g1297 91 375 C2H2 Transcription Factor Family AT1G30970 54.153 7.65e-76 238